Gm54787 Gene Detail

Summary

• Symbol
  Gm54787
• Name
  predicted gene, 54787

• Feature Type
  miRNA gene
• IDs
  MGI:6846051
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:90658352-90658502 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846051	miRNA gene	Chr6:90658352-90658502 (-)
129S1/SvImJ	ENSMUSG00200045041	miRNA gene	Chr6:87604777-87604921 (-)
A/J	ENSMUSG00195041129	miRNA gene	Chr6:87325407-87325551 (-)
AKR/J	ENSMUSG00220036351	miRNA gene	Chr6:86242751-86242901 (-)
BALB/cJ	ENSMUSG00180019532	miRNA gene	Chr6:87696866-87697016 (-)
C3H/HeJ	ENSMUSG00175027002	miRNA gene	Chr6:89744556-89744700 (+)
C57BL/6NJ	ENSMUSG00215035704	miRNA gene	Chr6:87700809-87700959 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018472	miRNA gene	Chr6:87804545-87804713 (-)
CBA/J	ENSMUSG00210046809	miRNA gene	Chr6:87477652-87477796 (-)
DBA/2J	ENSMUSG00185045322	miRNA gene	Chr6:88022690-88022834 (-)
FVB/NJ	ENSMUSG00205041894	miRNA gene	Chr6:86658085-86658229 (-)
JF1/MsJ	ENSUMUG00000049350	miRNA gene	Chr6:86963026-86963177 (-)
LP/J	ENSMUSG00230050872	miRNA gene	Chr6:89162577-89162721 (-)
NOD/ShiLtJ	ENSMUSG00190044475	miRNA gene	Chr6:87093008-87093152 (-)
NZO/HlLtJ	ENSMUSG00225019719	miRNA gene	Chr6:91173015-91173171 (-)
PWK/PhJ	ENSLUMG00010036999	miRNA gene	Chr6:86384923-86385079 (-)
SPRET/EiJ	ENSMSPG00010043610	miRNA gene	Chr6:88649146-88649293 (-)
WSB/EiJ	ENSIUOG00005034413	miRNA gene	Chr6:88087050-88087206 (-)

Homology

• Gene Tree
  Gm54787
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076797 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076797	Ensembl Gene Model | MGI Sequence Detail	151	C57BL/6J
transcript	ENSMUST00020183556	Ensembl | MGI Sequence Detail	151	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;