Gm54786 Gene Detail

Summary

• Symbol
  Gm54786
• Name
  predicted gene, 54786

• Feature Type
  miRNA gene
• IDs
  MGI:6846049
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:73771329-73771426 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846049	miRNA gene	Chr16:73771329-73771426 (+)
129S1/SvImJ	ENSMUSG00200008607	miRNA gene	Chr16:70659100-70659197 (+)
A/J	ENSMUSG00195001644	miRNA gene	Chr16:70435876-70435973 (+)
AKR/J	ENSMUSG00220005777	miRNA gene	Chr16:70605813-70605910 (+)
BALB/cJ	ENSMUSG00180001751	miRNA gene	Chr16:70510743-70510840 (+)
C3H/HeJ	ENSMUSG00175004674	miRNA gene	Chr16:70784100-70784197 (+)
C57BL/6NJ	ENSMUSG00215015426	miRNA gene	Chr16:70615243-70615340 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012799	miRNA gene	Chr16:70566302-70566399 (+)
CBA/J	ENSMUSG00210015360	miRNA gene	Chr16:70739064-70739161 (+)
DBA/2J	ENSMUSG00185004656	miRNA gene	Chr16:70675569-70675666 (+)
FVB/NJ	ENSMUSG00205012085	miRNA gene	Chr16:70415499-70415596 (+)
JF1/MsJ	ENSUMUG00000015567	miRNA gene	Chr16:70882529-70882626 (+)
LP/J	ENSMUSG00230020936	miRNA gene	Chr16:73232882-73232979 (+)
NOD/ShiLtJ	ENSMUSG00190016639	miRNA gene	Chr16:70649641-70649738 (+)
NZO/HlLtJ	ENSMUSG00225029857	miRNA gene	Chr16:76468376-76468473 (+)
PWK/PhJ	ENSLUMG00010011499	miRNA gene	Chr16:70562492-70562589 (+)
SPRET/EiJ	ENSMSPG00010015432	miRNA gene	Chr16:71350041-71350129 (+)
WSB/EiJ	ENSIUOG00005002426	miRNA gene	Chr16:70672645-70672742 (+)

Homology

• Gene Tree
  Gm54786
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075424 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075424	Ensembl Gene Model | MGI Sequence Detail	98	C57BL/6J
transcript	ENSMUST00020183493	Ensembl | MGI Sequence Detail	98	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;