Gm54775 Gene Detail

Summary

• Symbol
  Gm54775
• Name
  predicted gene, 54775

• Feature Type
  miRNA gene
• IDs
  MGI:6846027
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:51919330-51919437 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846027	miRNA gene	Chr13:51919330-51919437 (+)
129S1/SvImJ	ENSMUSG00200036131	miRNA gene	Chr13:48779295-48779402 (+)
A/J	ENSMUSG00195030127	miRNA gene	Chr13:48251472-48251579 (+)
AKR/J	ENSMUSG00220010018	miRNA gene	Chr13:47809916-47810027 (+)
BALB/cJ	ENSMUSG00180008777	miRNA gene	Chr13:48501197-48501304 (+)
C3H/HeJ	ENSMUSG00175031695	miRNA gene	Chr13:48284221-48284328 (+)
C57BL/6NJ	ENSMUSG00215007660	miRNA gene	Chr13:48318691-48318798 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032187	miRNA gene	Chr13:48684695-48684793 (+)
CBA/J	ENSMUSG00210027970	miRNA gene	Chr13:48494427-48494534 (+)
DBA/2J	ENSMUSG00185034293	miRNA gene	Chr13:49341532-49341639 (+)
FVB/NJ	ENSMUSG00205013702	miRNA gene	Chr13:48147443-48147550 (+)
JF1/MsJ	ENSUMUG00000019303	miRNA gene	Chr13:48735761-48735870 (+)
LP/J	ENSMUSG00230029604	miRNA gene	Chr13:58662133-58662240 (+)
NOD/ShiLtJ	ENSMUSG00190012762	miRNA gene	Chr13:48385878-48386015 (+)
NZO/HlLtJ	ENSMUSG00225035532	miRNA gene	Chr13:52412581-52412688 (+)
PWK/PhJ	ENSLUMG00010021750	miRNA gene	Chr13:47592353-47592462 (+)
SPRET/EiJ	ENSMSPG00010033099	miRNA gene	Chr13:48004846-48005003 (+)
WSB/EiJ	ENSIUOG00005028378	miRNA gene	Chr13:47769318-47769425 (+)

Homology

• Gene Tree
  Gm54775
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076130 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076130	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020183053	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;