Gm54773 Gene Detail

Summary

• Symbol
  Gm54773
• Name
  predicted gene, 54773

• Feature Type
  miRNA gene
• IDs
  MGI:6846023
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:37310933-37311042 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846023	miRNA gene	Chr3:37310933-37311042 (-)
129S1/SvImJ	ENSMUSG00200006349	miRNA gene	Chr3:34062381-34062490 (-)
129S1/SvImJ	ENSMUSG00200029472	miRNA gene	Chr17:43679304-43679413 (-)
A/J	ENSMUSG00195051029	miRNA gene	Chr12:108254572-108254681 (+)
A/J	ENSMUSG00195001541	miRNA gene	Chr3:34032253-34032362 (-)
A/J	ENSMUSG00195051087	miRNA gene	Chr12:108250022-108250131 (+)
AKR/J	ENSMUSG00220000814	miRNA gene	Chr3:34092220-34092329 (-)
BALB/cJ	ENSMUSG00180002881	miRNA gene	Chr3:34165540-34165649 (-)
C3H/HeJ	ENSMUSG00175003623	miRNA gene	Chr3:34062274-34062383 (-)
C3H/HeJ	ENSMUSG00175029724	miRNA gene	Chr15:40618176-40618284 (+)
C3H/HeJ	ENSMUSG00175017242	miRNA gene	Chr17:44242028-44242137 (-)
C57BL/6NJ	ENSMUSG00215001631	miRNA gene	Chr3:34439531-34439640 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210040955	miRNA gene	Chr17:43991624-43991733 (-)
CBA/J	ENSMUSG00210001601	miRNA gene	Chr3:34119827-34119936 (-)
DBA/2J	ENSMUSG00185031759	miRNA gene	ChrX:157880435-157880544 (+)
DBA/2J	ENSMUSG00185031066	miRNA gene	Chr17:46890630-46890739 (-)
DBA/2J	ENSMUSG00185001574	miRNA gene	Chr3:34318033-34318142 (-)
FVB/NJ	ENSMUSG00205000798	miRNA gene	Chr3:33483869-33483978 (-)
JF1/MsJ	ENSUMUG00000001177	miRNA gene	Chr3:33853370-33853479 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190001501	miRNA gene	Chr3:34360132-34360241 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010000698	miRNA gene	Chr3:33897293-33897402 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005014051	miRNA gene	Chr3:34367440-34367549 (-)

Homology

• Gene Tree
  Gm54773
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00002075204 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075204	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183397	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;