Gm54772 Gene Detail

Summary

• Symbol
  Gm54772
• Name
  predicted gene, 54772

• Feature Type
  snRNA gene
• IDs
  MGI:6846021
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:32942185-32942293 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846021	snRNA gene	Chr13:32942185-32942293 (+)
129S1/SvImJ	ENSMUSG00200031875	snRNA gene	Chr13:30136780-30136888 (+)
A/J	ENSMUSG00195040051	snRNA gene	Chr13:29244187-29244295 (+)
AKR/J	ENSMUSG00220013156	snRNA gene	Chr13:29103551-29103659 (+)
BALB/cJ	ENSMUSG00180024737	snRNA gene	Chr13:29544349-29544457 (+)
C3H/HeJ	ENSMUSG00175033886	snRNA gene	Chr13:29566594-29566702 (+)
C57BL/6NJ	ENSMUSG00215015491	snRNA gene	Chr13:29734946-29735054 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010540	snRNA gene	Chr13:29698859-29698967 (+)
CBA/J	ENSMUSG00210028099	snRNA gene	Chr13:29510174-29510282 (+)
DBA/2J	ENSMUSG00185033165	snRNA gene	Chr13:30329264-30329372 (+)
FVB/NJ	ENSMUSG00205031321	snRNA gene	Chr13:29353329-29353437 (+)
JF1/MsJ	ENSUMUG00000017212	snRNA gene	Chr13:29978324-29978432 (+)
LP/J	ENSMUSG00230020694	snRNA gene	Chr13:39653825-39653933 (+)
NOD/ShiLtJ	ENSMUSG00190037236	snRNA gene	Chr13:29717413-29717521 (+)
NZO/HlLtJ	ENSMUSG00225035298	snRNA gene	Chr13:33451518-33451626 (+)
PWK/PhJ	ENSLUMG00010030092	snRNA gene	Chr13:28776693-28776801 (+)
SPRET/EiJ	ENSMSPG00010027127	snRNA gene	Chr13:28876111-28876219 (+)
WSB/EiJ	ENSIUOG00005017144	snRNA gene	Chr13:28916869-28916977 (+)

Homology

• Gene Tree
  Gm54772
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074895 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074895	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020182106	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;