Gm54771 Gene Detail

Summary

• Symbol
  Gm54771
• Name
  predicted gene, 54771

• Feature Type
  lncRNA gene
• IDs
  MGI:6846019
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:32797999-32866498 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1624 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846019	lncRNA gene	Chr13:32797999-32866498 (+)
129S1/SvImJ	ENSMUSG00200031893	lncRNA gene	Chr13:29992572-30061073 (+)
A/J	ENSMUSG00195040069	lncRNA gene	Chr13:29100039-29168496 (+)
AKR/J	ENSMUSG00220013166	lncRNA gene	Chr13:28959365-29027833 (+)
BALB/cJ	ENSMUSG00180024796	lncRNA gene	Chr13:29400194-29468650 (+)
C3H/HeJ	ENSMUSG00175033958	lncRNA gene	Chr13:29422467-29490911 (+)
C57BL/6NJ	ENSMUSG00215015579	lncRNA gene	Chr13:29590721-29659243 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010545	lncRNA gene	Chr13:29557821-29623366 (+)
CBA/J	ENSMUSG00210028119	lncRNA gene	Chr13:29366046-29434478 (+)
DBA/2J	ENSMUSG00185033213	lncRNA gene	Chr13:30185144-30253604 (+)
FVB/NJ	ENSMUSG00205031421	lncRNA gene	Chr13:29209102-29277615 (+)
JF1/MsJ	ENSUMUG00000017191	lncRNA gene	Chr13:29833766-29898908 (+)
LP/J	ENSMUSG00230020887	lncRNA gene	Chr13:39509682-39578128 (+)
NOD/ShiLtJ	ENSMUSG00190037310	lncRNA gene	Chr13:29573194-29641703 (+)
NZO/HlLtJ	ENSMUSG00225035456	lncRNA gene	Chr13:33307336-33375823 (+)
PWK/PhJ	ENSLUMG00010030071	lncRNA gene	Chr13:28628412-28697234 (+)
SPRET/EiJ	ENSMSPG00010027149	lncRNA gene	Chr13:28726230-28791982 (+)
WSB/EiJ	ENSIUOG00005017153	lncRNA gene	Chr13:28775384-28841323 (+)

Homology

• Gene Tree
  Gm54771
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118652 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118652	Ensembl Gene Model | MGI Sequence Detail	68500	C57BL/6J
transcript	ENSMUST00000239419	Ensembl | MGI Sequence Detail	358	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;