Gm54769 Gene Detail

Summary

• Symbol
  Gm54769
• Name
  predicted gene, 54769

• Feature Type
  rRNA gene
• IDs
  MGI:6846015
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:31193165-31193277 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846015	rRNA gene	Chr10:31193165-31193277 (-)
129S1/SvImJ	ENSMUSG00200010682	rRNA gene	Chr10:28039751-28039863 (-)
A/J	ENSMUSG00195014765	rRNA gene	Chr10:28319362-28319474 (-)
AKR/J	ENSMUSG00220011679	rRNA gene	Chr10:28004441-28004553 (-)
BALB/cJ	ENSMUSG00180019302	rRNA gene	Chr10:28439493-28439605 (-)
C3H/HeJ	ENSMUSG00175026844	rRNA gene	Chr10:28194495-28194607 (-)
C57BL/6NJ	ENSMUSG00215013139	rRNA gene	Chr10:27985367-27985479 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014669	rRNA gene	Chr10:27818441-27818553 (-)
CBA/J	ENSMUSG00210023531	rRNA gene	Chr10:28122016-28122128 (-)
DBA/2J	ENSMUSG00185007711	rRNA gene	Chr10:28274796-28274908 (-)
FVB/NJ	ENSMUSG00205010963	rRNA gene	Chr10:28257122-28257234 (-)
JF1/MsJ	ENSUMUG00000019282	rRNA gene	Chr10:28088963-28089075 (-)
LP/J	ENSMUSG00230011326	rRNA gene	Chr10:30040436-30040548 (-)
NOD/ShiLtJ	ENSMUSG00190016235	rRNA gene	Chr10:28386421-28386533 (-)
NZO/HlLtJ	ENSMUSG00225033882	rRNA gene	Chr10:34298777-34298889 (-)
PWK/PhJ	ENSLUMG00010010508	rRNA gene	Chr10:27920988-27921100 (-)
SPRET/EiJ	ENSMSPG00010015323	rRNA gene	Chr10:28954310-28954422 (-)
WSB/EiJ	ENSIUOG00005031166	rRNA gene	Chr10:27755797-27755909 (-)

Homology

• Gene Tree
  Gm54769
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075988 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075988	Ensembl Gene Model | MGI Sequence Detail	113	C57BL/6J
transcript	ENSMUST00020182152	Ensembl | MGI Sequence Detail	113	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;