Gm54763 Gene Detail

Summary

• Symbol
  Gm54763
• Name
  predicted gene, 54763

• Feature Type
  miRNA gene
• IDs
  MGI:6846003
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:24813952-24814045 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846003	miRNA gene	Chr17:24813952-24814045 (+)
129S1/SvImJ	ENSMUSG00200054326	miRNA gene	Chr17:20261123-20261216 (+)
A/J	ENSMUSG00195054381	miRNA gene	Chr17:21279959-21280052 (+)
AKR/J	ENSMUSG00220029016	miRNA gene	Chr17:20326202-20326295 (+)
BALB/cJ	ENSMUSG00180051547	miRNA gene	Chr17:20553420-20553513 (+)
C3H/HeJ	ENSMUSG00175053708	miRNA gene	Chr17:20311824-20311917 (+)
C57BL/6NJ	ENSMUSG00215054284	miRNA gene	Chr17:20321934-20322027 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051508	miRNA gene	Chr17:20892884-20892977 (+)
CBA/J	ENSMUSG00210042706	miRNA gene	Chr17:20150650-20150743 (+)
DBA/2J	ENSMUSG00185053425	miRNA gene	Chr17:22368303-22368396 (+)
FVB/NJ	ENSMUSG00205053606	miRNA gene	Chr17:20619987-20620080 (+)
JF1/MsJ	ENSUMUG00000057499	miRNA gene	Chr17:21813730-21813823 (+)
LP/J	ENSMUSG00230055108	miRNA gene	Chr17:23765771-23765864 (+)
NOD/ShiLtJ	ENSMUSG00190054148	miRNA gene	Chr17:20257033-20257126 (+)
NZO/HlLtJ	ENSMUSG00225054661	miRNA gene	Chr17:25687430-25687523 (+)
PWK/PhJ	ENSLUMG00010020688	miRNA gene	Chr17:19722616-19722709 (+)
SPRET/EiJ	ENSMSPG00010049730	miRNA gene	Chr17:21058621-21058714 (+)
WSB/EiJ	ENSIUOG00005052183	miRNA gene	Chr17:21005774-21005867 (+)

Homology

• Gene Tree
  Gm54763
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076170 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076170	Ensembl Gene Model | MGI Sequence Detail	94	C57BL/6J
transcript	ENSMUST00020183045	Ensembl | MGI Sequence Detail	94	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm54763:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5033	Chr17:24812113-24812126 (+)	-1,832 bp