Gm54762 Gene Detail

Summary

• Symbol
  Gm54762
• Name
  predicted gene, 54762

• Feature Type
  rRNA gene
• IDs
  MGI:6846001
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:30549130-30549223 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846001	rRNA gene	Chr10:30549130-30549223 (-)
129S1/SvImJ	ENSMUSG00200010590	rRNA gene	Chr10:27395661-27395754 (-)
A/J	ENSMUSG00195014848	rRNA gene	Chr10:27668639-27668732 (-)
AKR/J	ENSMUSG00220011652	rRNA gene	Chr10:27360308-27360401 (-)
BALB/cJ	ENSMUSG00180019564	rRNA gene	Chr10:27793118-27793211 (-)
C3H/HeJ	ENSMUSG00175025793	rRNA gene	Chr10:27550410-27550503 (-)
C57BL/6NJ	ENSMUSG00215014187	rRNA gene	Chr10:27341310-27341403 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014128	rRNA gene	Chr10:27170112-27170205 (-)
CBA/J	ENSMUSG00210023579	rRNA gene	Chr10:27475672-27475765 (-)
DBA/2J	ENSMUSG00185007685	rRNA gene	Chr10:27628393-27628486 (-)
FVB/NJ	ENSMUSG00205010113	rRNA gene	Chr10:27619092-27619185 (-)
JF1/MsJ	ENSUMUG00000018145	rRNA gene	Chr10:27440417-27440510 (-)
LP/J	ENSMUSG00230011535	rRNA gene	Chr10:29396377-29396470 (-)
NOD/ShiLtJ	ENSMUSG00190015947	rRNA gene	Chr10:27740070-27740163 (-)
NZO/HlLtJ	ENSMUSG00225034327	rRNA gene	Chr10:33655438-33655531 (-)
PWK/PhJ	ENSLUMG00010010368	rRNA gene	Chr10:27272678-27272771 (-)
SPRET/EiJ	ENSMSPG00010015507	rRNA gene	Chr10:28295775-28295868 (-)
WSB/EiJ	ENSIUOG00005031154	rRNA gene	Chr10:27110293-27110386 (-)

Homology

• Gene Tree
  Gm54762
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075780 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075780	Ensembl Gene Model | MGI Sequence Detail	94	C57BL/6J
transcript	ENSMUST00020182023	Ensembl | MGI Sequence Detail	94	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;