Gm54749 Gene Detail

Summary

• Symbol
  Gm54749
• Name
  predicted gene, 54749

• Feature Type
  miRNA gene
• IDs
  MGI:6845975
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:50833573-50833681 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845975	miRNA gene	Chr13:50833573-50833681 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195030581	miRNA gene	Chr13:47163086-47163194 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180009108	miRNA gene	Chr13:47031542-47031650 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215006665	miRNA gene	Chr13:47232159-47232267 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033129	miRNA gene	Chr13:47603046-47603154 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185031849	miRNA gene	Chr13:48255104-48255212 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000018083	miRNA gene	Chr13:47523065-47523173 (-)
LP/J	ENSMUSG00230029404	miRNA gene	Chr13:57575840-57575948 (-)
NOD/ShiLtJ	ENSMUSG00190012427	miRNA gene	Chr13:47290641-47290749 (-)
NZO/HlLtJ	ENSMUSG00225035469	miRNA gene	Chr13:51326276-51326384 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010034695	miRNA gene	Chr13:46601626-46601734 (-)
SPRET/EiJ	ENSMSPG00010029973	miRNA gene	Chr13:46185314-46185422 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54749
  

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00002076726 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076726	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020182398	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;