Gm54747 Gene Detail

Summary

• Symbol
  Gm54747
• Name
  predicted gene, 54747

• Feature Type
  rRNA gene
• IDs
  MGI:6845971
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:119883059-119883176 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845971	rRNA gene	Chr12:119883059-119883176 (-)
129S1/SvImJ	ENSMUSG00200028213	rRNA gene	Chr12:112261245-112261362 (-)
A/J	ENSMUSG00195010408	rRNA gene	Chr12:114946299-114946416 (-)
AKR/J	ENSMUSG00220039525	rRNA gene	Chr12:112062399-112062516 (-)
BALB/cJ	ENSMUSG00180006529	rRNA gene	Chr12:114758168-114758285 (-)
C3H/HeJ	ENSMUSG00175002245	rRNA gene	Chr12:115830126-115830243 (-)
C57BL/6NJ	ENSMUSG00215004832	rRNA gene	Chr12:112755315-112755432 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044056	rRNA gene	Chr12:112734727-112734844 (-)
CBA/J	ENSMUSG00210012314	rRNA gene	Chr12:113112705-113112822 (-)
DBA/2J	ENSMUSG00185014761	rRNA gene	Chr12:115610785-115610902 (-)
FVB/NJ	ENSMUSG00205005200	rRNA gene	Chr12:114113920-114114037 (-)
JF1/MsJ	ENSUMUG00000029295	rRNA gene	Chr12:119906330-119906447 (-)
LP/J	ENSMUSG00230046092	rRNA gene	Chr12:121979762-121979879 (-)
NOD/ShiLtJ	ENSMUSG00190029998	rRNA gene	Chr12:111630036-111630153 (-)
NZO/HlLtJ	ENSMUSG00225044153	rRNA gene	Chr12:123813686-123813803 (-)
PWK/PhJ	ENSLUMG00010004182	rRNA gene	Chr12:112959283-112959400 (-)
SPRET/EiJ	ENSMSPG00010012008	rRNA gene	Chr12:115737518-115737635 (-)
WSB/EiJ	ENSIUOG00005041932	rRNA gene	Chr12:112374030-112374147 (-)

Homology

• Gene Tree
  Gm54747
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075469 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075469	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00020183677	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;