Gm54743 Gene Detail

Summary

• Symbol
  Gm54743
• Name
  predicted gene, 54743

• Feature Type
  miRNA gene
• IDs
  MGI:6845963
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:65229023-65229132 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  21

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845963	miRNA gene	Chr16:65229023-65229132 (+)
129S1/SvImJ	ENSMUSG00200008350	miRNA gene	Chr16:62142621-62142730 (+)
A/J	ENSMUSG00195001643	miRNA gene	Chr16:61854872-61854981 (+)
AKR/J	ENSMUSG00220005565	miRNA gene	Chr16:62124281-62124390 (+)
BALB/cJ	ENSMUSG00180001645	miRNA gene	Chr16:61984106-61984215 (+)
BALB/cJ	ENSMUSG00180003807	miRNA gene	Chr12:36560145-36560254 (+)
C3H/HeJ	ENSMUSG00175018312	miRNA gene	Chr12:39627777-39627886 (+)
C3H/HeJ	ENSMUSG00175004533	miRNA gene	Chr16:62266602-62266711 (+)
C57BL/6NJ	ENSMUSG00215014435	miRNA gene	Chr16:62068156-62068265 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012631	miRNA gene	Chr16:62110794-62110904 (+)
CBA/J	ENSMUSG00210015193	miRNA gene	Chr16:62205331-62205440 (+)
DBA/2J	ENSMUSG00185004647	miRNA gene	Chr16:62161621-62161730 (+)
FVB/NJ	ENSMUSG00205012164	miRNA gene	Chr16:61947143-61947252 (+)
JF1/MsJ	ENSUMUG00000050958	miRNA gene	Chr4:109465151-109465257 (-)
JF1/MsJ	ENSUMUG00000016189	miRNA gene	Chr16:62300447-62300557 (+)
LP/J	ENSMUSG00230007416	miRNA gene	Chr16:64707817-64707926 (+)
NOD/ShiLtJ	ENSMUSG00190016612	miRNA gene	Chr16:62202210-62202319 (+)
NZO/HlLtJ	ENSMUSG00225036221	miRNA gene	Chr16:67953760-67953869 (+)
NZO/HlLtJ	ENSMUSG00225031759	miRNA gene	Chr12:47284208-47284317 (+)
PWK/PhJ	ENSLUMG00010011933	miRNA gene	Chr16:61944262-61944371 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005002312	miRNA gene	Chr16:62244789-62244898 (+)

Homology

• Gene Tree
  Gm54743
  

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00002075473 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075473	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020181662	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;