Gm54742 Gene Detail

Summary

• Symbol
  Gm54742
• Name
  predicted gene, 54742

• Feature Type
  miRNA gene
• IDs
  MGI:6845961
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:64738585-64738668 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845961	miRNA gene	Chr16:64738585-64738668 (-)
129S1/SvImJ	ENSMUSG00200008718	miRNA gene	Chr16:61714933-61715016 (-)
A/J	ENSMUSG00195001635	miRNA gene	Chr16:61356323-61356406 (-)
AKR/J	ENSMUSG00220005633	miRNA gene	Chr16:61637432-61637515 (-)
BALB/cJ	ENSMUSG00180001685	miRNA gene	Chr16:61484944-61485027 (-)
C3H/HeJ	ENSMUSG00175004590	miRNA gene	Chr16:61764851-61764934 (-)
C57BL/6NJ	ENSMUSG00215016085	miRNA gene	Chr16:61578450-61578533 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012665	miRNA gene	Chr16:61637050-61637133 (-)
CBA/J	ENSMUSG00210015302	miRNA gene	Chr16:61715882-61715965 (-)
DBA/2J	ENSMUSG00185004652	miRNA gene	Chr16:61662254-61662337 (-)
FVB/NJ	ENSMUSG00205011934	miRNA gene	Chr16:61455854-61455937 (-)
JF1/MsJ	ENSUMUG00000016377	miRNA gene	Chr16:61768252-61768335 (-)
LP/J	ENSMUSG00230007388	miRNA gene	Chr16:64216732-64216815 (-)
NOD/ShiLtJ	ENSMUSG00190016573	miRNA gene	Chr16:61713263-61713346 (-)
NZO/HlLtJ	ENSMUSG00225036084	miRNA gene	Chr16:67454213-67454296 (-)
NZO/HlLtJ	ENSMUSG00225007694	miRNA gene	Chr6:134912831-134912914 (-)
PWK/PhJ	ENSLUMG00010011619	miRNA gene	Chr16:61475883-61475966 (-)
SPRET/EiJ	ENSMSPG00010002114	miRNA gene	Chr16:62208148-62208231 (-)
WSB/EiJ	ENSIUOG00005002401	miRNA gene	Chr16:61765100-61765183 (-)

Homology

• Gene Tree
  Gm54742
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002076385 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076385	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00020183766	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;