Gm54741 Gene Detail

Summary

• Symbol
  Gm54741
• Name
  predicted gene, 54741

• Feature Type
  miRNA gene
• IDs
  MGI:6845959
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:50416430-50416538 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845959	miRNA gene	Chr13:50416430-50416538 (+)
129S1/SvImJ	ENSMUSG00200036269	miRNA gene	Chr13:47545388-47545496 (+)
A/J	ENSMUSG00195030832	miRNA gene	Chr13:47032191-47032299 (-)
AKR/J	ENSMUSG00220009909	miRNA gene	Chr13:46831144-46831252 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175032185	miRNA gene	Chr13:46704446-46704554 (+)
C3H/HeJ	ENSMUSG00175032165	miRNA gene	Chr13:46676375-46676483 (+)
C3H/HeJ	ENSMUSG00175029685	miRNA gene	Chr13:47086819-47086927 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034231	miRNA gene	Chr13:47022469-47022606 (+)
CAST/EiJ	ENSTCUG00005032812	miRNA gene	Chr13:47464776-47464884 (-)
CBA/J	ENSMUSG00210028558	miRNA gene	Chr13:47023825-47023933 (+)
DBA/2J	ENSMUSG00185032599	miRNA gene	Chr13:47837935-47838043 (+)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230029406	miRNA gene	Chr13:57158707-57158815 (+)
NOD/ShiLtJ	ENSMUSG00190012871	miRNA gene	Chr13:46949885-46949993 (+)
NZO/HlLtJ	ENSMUSG00225036564	miRNA gene	Chr13:50909130-50909238 (+)
PWK/PhJ	ENSLUMG00010022278	miRNA gene	Chr13:46155524-46155632 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54741
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002076704 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076704	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020181681	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;