Gm54736 Gene Detail

Summary

• Symbol
  Gm54736
• Name
  predicted gene, 54736

• Feature Type
  miRNA gene
• IDs
  MGI:6845949
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:19138436-19138545 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845949	miRNA gene	Chr16:19138436-19138545 (+)
129S1/SvImJ	ENSMUSG00200046598	miRNA gene	Chr16:16135745-16135854 (+)
A/J	ENSMUSG00195035778	miRNA gene	Chr16:15693179-15693288 (+)
AKR/J	ENSMUSG00220047207	miRNA gene	Chr16:16008250-16008359 (+)
BALB/cJ	ENSMUSG00180040337	miRNA gene	Chr16:15934479-15934588 (+)
C3H/HeJ	ENSMUSG00175051574	miRNA gene	Chr16:16079130-16079239 (+)
C57BL/6NJ	ENSMUSG00215041564	miRNA gene	Chr16:15800468-15800577 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015354	miRNA gene	Chr13:16339892-16340001 (+)
CAST/EiJ	ENSTCUG00005032845	miRNA gene	Chr7:7788252-7788357 (-)
CAST/EiJ	ENSTCUG00005053798	miRNA gene	Chr11:70330732-70330840 (+)
CAST/EiJ	ENSTCUG00005046188	miRNA gene	Chr16:16446750-16446859 (+)
CBA/J	ENSMUSG00210048096	miRNA gene	Chr16:16095404-16095513 (+)
DBA/2J	ENSMUSG00185033363	miRNA gene	Chr16:16040073-16040182 (+)
FVB/NJ	ENSMUSG00205049122	miRNA gene	Chr16:16049390-16049499 (+)
JF1/MsJ	ENSUMUG00000053889	miRNA gene	Chr16:16288005-16288114 (+)
JF1/MsJ	ENSUMUG00000043811	miRNA gene	Chr18:1019589-1019698 (-)
LP/J	ENSMUSG00230047408	miRNA gene	Chr16:18619413-18619522 (+)
NOD/ShiLtJ	ENSMUSG00190049785	miRNA gene	Chr16:16181641-16181750 (+)
NZO/HlLtJ	ENSMUSG00225038487	miRNA gene	Chr16:21865242-21865351 (+)
PWK/PhJ	ENSLUMG00010048984	miRNA gene	Chr16:16076733-16076842 (+)
SPRET/EiJ	ENSMSPG00010046620	miRNA gene	Chr16:15987177-15987286 (+)
WSB/EiJ	ENSIUOG00005044003	miRNA gene	Chr16:16242634-16242743 (+)

Homology

• Gene Tree
  Gm54736
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00002075049 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075049	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183314	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;