Gm54729 Gene Detail

Summary

• Symbol
  Gm54729
• Name
  predicted gene, 54729

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845936
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:43894216-43894528 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845936	unclassified non-coding RNA gene	Chr18:43894216-43894528 (+)
129S1/SvImJ	ENSMUSG00200031508	unclassified non-coding RNA gene	Chr18:40932916-40933228 (+)
A/J	ENSMUSG00195025743	unclassified non-coding RNA gene	Chr18:41091449-41091761 (+)
AKR/J	ENSMUSG00220021399	unclassified non-coding RNA gene	Chr18:41051083-41051395 (+)
BALB/cJ	ENSMUSG00180008119	unclassified non-coding RNA gene	Chr18:41542624-41542936 (+)
C3H/HeJ	ENSMUSG00175011058	unclassified non-coding RNA gene	Chr18:41043623-41043935 (+)
C57BL/6NJ	ENSMUSG00215009834	unclassified non-coding RNA gene	Chr18:40773035-40773347 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014009	unclassified non-coding RNA gene	Chr18:40629789-40630101 (+)
CBA/J	ENSMUSG00210022598	unclassified non-coding RNA gene	Chr18:41108391-41108703 (+)
DBA/2J	ENSMUSG00185028497	unclassified non-coding RNA gene	Chr18:41017082-41017394 (+)
FVB/NJ	ENSMUSG00205015905	unclassified non-coding RNA gene	Chr18:40659578-40659890 (+)
JF1/MsJ	ENSUMUG00000028956	unclassified non-coding RNA gene	Chr18:41165811-41166123 (+)
LP/J	ENSMUSG00230028800	unclassified non-coding RNA gene	Chr18:43122566-43122878 (+)
NOD/ShiLtJ	ENSMUSG00190028613	unclassified non-coding RNA gene	Chr18:40785843-40786155 (+)
NZO/HlLtJ	ENSMUSG00225027512	unclassified non-coding RNA gene	Chr18:42994265-42994577 (+)
PWK/PhJ	ENSLUMG00010021952	unclassified non-coding RNA gene	Chr18:41258857-41259169 (+)
SPRET/EiJ	ENSMSPG00010013264	unclassified non-coding RNA gene	Chr18:41387940-41388252 (+)
WSB/EiJ	ENSIUOG00005009653	unclassified non-coding RNA gene	Chr18:40748044-40748356 (+)

Homology

• Gene Tree
  Gm54729
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075964 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075964	Ensembl Gene Model | MGI Sequence Detail	313	C57BL/6J
transcript	ENSMUST00020181702	Ensembl | MGI Sequence Detail	313	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;