Gm54725 Gene Detail

Summary

• Symbol
  Gm54725
• Name
  predicted gene, 54725

• Feature Type
  miRNA gene
• IDs
  MGI:6845928
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:60519542-60519654 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845928	miRNA gene	Chr16:60519542-60519654 (-)
129S1/SvImJ	ENSMUSG00200021262	miRNA gene	Chr16:57488798-57488910 (-)
A/J	ENSMUSG00195025333	miRNA gene	Chr16:57088162-57088274 (-)
AKR/J	ENSMUSG00220019755	miRNA gene	Chr16:57433295-57433407 (-)
BALB/cJ	ENSMUSG00180023975	miRNA gene	Chr16:57258597-57258709 (-)
C3H/HeJ	ENSMUSG00175017834	miRNA gene	Chr16:57512647-57512759 (-)
C57BL/6NJ	ENSMUSG00215023421	miRNA gene	Chr16:57338594-57338706 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014168	miRNA gene	Chr16:57481443-57481555 (-)
CBA/J	ENSMUSG00210019637	miRNA gene	Chr16:57488691-57488803 (-)
DBA/2J	ENSMUSG00185025655	miRNA gene	Chr16:57435926-57436038 (-)
FVB/NJ	ENSMUSG00205010474	miRNA gene	Chr16:57216876-57216988 (-)
JF1/MsJ	ENSUMUG00000027971	miRNA gene	Chr16:57634445-57634557 (-)
LP/J	ENSMUSG00230009036	miRNA gene	Chr16:59989961-59990073 (-)
NOD/ShiLtJ	ENSMUSG00190007386	miRNA gene	Chr16:57436299-57436411 (-)
NZO/HlLtJ	ENSMUSG00225036046	miRNA gene	Chr16:63061563-63061675 (-)
PWK/PhJ	ENSLUMG00010011887	miRNA gene	Chr16:57315627-57315739 (-)
SPRET/EiJ	ENSMSPG00010001677	miRNA gene	Chr16:57972452-57972564 (-)
WSB/EiJ	ENSIUOG00005009508	miRNA gene	Chr16:57608426-57608538 (-)

Homology

• Gene Tree
  Gm54725
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075526 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075526	Ensembl Gene Model | MGI Sequence Detail	113	C57BL/6J
transcript	ENSMUST00020183779	Ensembl | MGI Sequence Detail	113	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;