Gm54724 Gene Detail

Summary

• Symbol
  Gm54724
• Name
  predicted gene, 54724

• Feature Type
  miRNA gene
• IDs
  MGI:6845926
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:60189417-60189526 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  59

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845926	miRNA gene	Chr16:60189417-60189526 (-)
129S1/SvImJ	ENSMUSG00200021265	miRNA gene	Chr16:57158679-57158788 (-)
A/J	ENSMUSG00195000328	miRNA gene	Chr4:24813924-24814033 (-)
A/J	ENSMUSG00195033715	miRNA gene	Chr11:117838025-117838134 (-)
A/J	ENSMUSG00195033726	miRNA gene	Chr11:117842585-117842694 (-)
A/J	ENSMUSG00195025140	miRNA gene	Chr9:45951666-45951775 (+)
A/J	ENSMUSG00195023578	miRNA gene	Chr2:152096521-152096630 (-)
A/J	ENSMUSG00195021264	miRNA gene	ChrX:103918091-103918200 (+)
A/J	ENSMUSG00195025337	miRNA gene	Chr16:56762759-56762868 (-)
A/J	ENSMUSG00195021269	miRNA gene	ChrX:103926907-103927016 (+)
AKR/J	ENSMUSG00220019763	miRNA gene	Chr16:57105208-57105317 (-)
BALB/cJ	ENSMUSG00180000369	miRNA gene	Chr4:24325454-24325563 (-)
BALB/cJ	ENSMUSG00180028147	miRNA gene	ChrX:100556469-100556578 (+)
BALB/cJ	ENSMUSG00180028168	miRNA gene	ChrX:100565285-100565394 (+)
BALB/cJ	ENSMUSG00180052867	miRNA gene	Chr11:118130934-118131043 (-)
BALB/cJ	ENSMUSG00180052871	miRNA gene	Chr11:118135494-118135603 (-)
BALB/cJ	ENSMUSG00180024003	miRNA gene	Chr16:56933216-56933325 (-)
BALB/cJ	ENSMUSG00180000371	miRNA gene	Chr4:24330011-24330120 (-)
BALB/cJ	ENSMUSG00180028661	miRNA gene	Chr5:87120055-87120164 (-)
BALB/cJ	ENSMUSG00180041357	miRNA gene	Chr7:80717425-80717534 (-)
BALB/cJ	ENSMUSG00180034530	miRNA gene	Chr9:46063039-46063148 (+)
C3H/HeJ	ENSMUSG00175021968	miRNA gene	ChrX:104216708-104216817 (+)
C3H/HeJ	ENSMUSG00175017002	miRNA gene	Chr9:46075198-46075307 (+)
C3H/HeJ	ENSMUSG00175017840	miRNA gene	Chr16:57182535-57182644 (-)
C3H/HeJ	ENSMUSG00175030756	miRNA gene	Chr5:70562976-70563085 (+)
C3H/HeJ	ENSMUSG00175048471	miRNA gene	Chr11:118088456-118088565 (-)
C3H/HeJ	ENSMUSG00175025438	miRNA gene	Chr7:81417445-81417554 (-)
C3H/HeJ	ENSMUSG00175030740	miRNA gene	Chr5:70558224-70558333 (+)
C3H/HeJ	ENSMUSG00175046679	miRNA gene	Chr5:89220826-89220935 (-)
C3H/HeJ	ENSMUSG00175021966	miRNA gene	ChrX:104207892-104208001 (+)
C3H/HeJ	ENSMUSG00175048483	miRNA gene	Chr11:118093016-118093125 (-)
C57BL/6NJ	ENSMUSG00215023476	miRNA gene	Chr16:57008449-57008558 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210027929	miRNA gene	Chr14:11269696-11269805 (+)
CBA/J	ENSMUSG00210019640	miRNA gene	Chr16:57158590-57158699 (-)
DBA/2J	ENSMUSG00185025662	miRNA gene	Chr16:57110551-57110660 (-)
DBA/2J	ENSMUSG00185034727	miRNA gene	Chr7:85589083-85589192 (-)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230051418	miRNA gene	Chr11:119186607-119186716 (-)
LP/J	ENSMUSG00230012718	miRNA gene	Chr12:67535382-67535491 (-)
LP/J	ENSMUSG00230045814	miRNA gene	Chr7:91678072-91678181 (-)
LP/J	ENSMUSG00230008851	miRNA gene	Chr16:59659835-59659944 (-)
LP/J	ENSMUSG00230045810	miRNA gene	Chr7:91673517-91673626 (-)
LP/J	ENSMUSG00230008156	miRNA gene	Chr13:13644915-13645024 (-)
LP/J	ENSMUSG00230029119	miRNA gene	Chr5:94634041-94634150 (-)
LP/J	ENSMUSG00230051415	miRNA gene	Chr11:119182047-119182156 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225012095	miRNA gene	Chr7:89948594-89948703 (-)
NZO/HlLtJ	ENSMUSG00225034993	miRNA gene	Chr13:7550268-7550377 (-)
NZO/HlLtJ	ENSMUSG00225035307	miRNA gene	Chr12:25217269-25217378 (+)
NZO/HlLtJ	ENSMUSG00225054100	miRNA gene	Chr11:121335319-121335428 (-)
NZO/HlLtJ	ENSMUSG00225054105	miRNA gene	Chr11:121330759-121330868 (-)
NZO/HlLtJ	ENSMUSG00225009129	miRNA gene	Chr4:31800315-31800424 (-)
NZO/HlLtJ	ENSMUSG00225009135	miRNA gene	Chr4:31804872-31804981 (-)
NZO/HlLtJ	ENSMUSG00225010384	miRNA gene	Chr5:99775009-99775118 (-)
NZO/HlLtJ	ENSMUSG00225036008	miRNA gene	Chr16:62729799-62729908 (-)
NZO/HlLtJ	ENSMUSG00225034997	miRNA gene	Chr13:7554827-7554936 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005030940	miRNA gene	Chr5:89898351-89898460 (-)
WSB/EiJ	ENSIUOG00005049412	miRNA gene	Chr11:117926459-117926568 (-)
WSB/EiJ	ENSIUOG00005001159	miRNA gene	Chr12:58347556-58347665 (-)
WSB/EiJ	ENSIUOG00005023435	miRNA gene	Chr9:45686522-45686631 (+)
WSB/EiJ	ENSIUOG00005009515	miRNA gene	Chr16:57263988-57264097 (-)

Homology

• Gene Tree
  Gm54724
  

Sequences &
Gene Models

• All Sequences
  61

• Ensembl
  ENSMUSG00002075313 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075313	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183301	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;