Gm54717 Gene Detail

Summary

• Symbol
  Gm54717
• Name
  predicted gene, 54717

• Feature Type
  miRNA gene
• IDs
  MGI:6845912
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:42434955-42435017 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  39 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845912	miRNA gene	Chr18:42434955-42435017 (+)
129S1/SvImJ	ENSMUSG00200044732	miRNA gene	Chr18:39461534-39461596 (+)
A/J	ENSMUSG00195038398	miRNA gene	Chr18:39616485-39616547 (+)
AKR/J	ENSMUSG00220017327	miRNA gene	Chr18:39580854-39580916 (+)
BALB/cJ	ENSMUSG00180022747	miRNA gene	Chr18:40061906-40061968 (+)
C3H/HeJ	ENSMUSG00175039870	miRNA gene	Chr18:39563030-39563092 (+)
C57BL/6NJ	ENSMUSG00215029664	miRNA gene	Chr18:39312564-39312626 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024372	miRNA gene	Chr18:39155890-39155952 (+)
CBA/J	ENSMUSG00210021605	miRNA gene	Chr18:39627650-39627712 (+)
DBA/2J	ENSMUSG00185021511	miRNA gene	Chr18:39536481-39536543 (+)
FVB/NJ	ENSMUSG00205037691	miRNA gene	Chr18:39195282-39195344 (+)
JF1/MsJ	ENSUMUG00000050563	miRNA gene	Chr18:39666590-39666652 (+)
LP/J	ENSMUSG00230028709	miRNA gene	Chr18:41652057-41652119 (+)
NOD/ShiLtJ	ENSMUSG00190023941	miRNA gene	Chr18:39328218-39328280 (+)
NZO/HlLtJ	ENSMUSG00225027504	miRNA gene	Chr18:41536226-41536288 (+)
PWK/PhJ	ENSLUMG00010012987	miRNA gene	Chr18:39798245-39798307 (+)
SPRET/EiJ	ENSMSPG00010022944	miRNA gene	Chr18:39927661-39927723 (+)
WSB/EiJ	ENSIUOG00005008325	miRNA gene	Chr18:39286110-39286172 (+)

Homology

• Gene Tree
  Gm54717
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075016 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075016	Ensembl Gene Model | MGI Sequence Detail	63	C57BL/6J
transcript	ENSMUST00020182355	Ensembl | MGI Sequence Detail	63	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;