Gm54711 Gene Detail

Summary

• Symbol
  Gm54711
• Name
  predicted gene, 54711

• Feature Type
  rRNA gene
• IDs
  MGI:6845900
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:117537962-117538067 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845900	rRNA gene	Chr12:117537962-117538067 (+)
129S1/SvImJ	ENSMUSG00200029466	rRNA gene	Chr12:109897307-109897412 (+)
A/J	ENSMUSG00195010457	rRNA gene	Chr12:112582969-112583074 (+)
AKR/J	ENSMUSG00220043548	rRNA gene	Chr12:109673850-109673955 (+)
BALB/cJ	ENSMUSG00180006574	rRNA gene	Chr12:112397634-112397739 (+)
C3H/HeJ	ENSMUSG00175002252	rRNA gene	Chr12:113474228-113474333 (+)
C57BL/6NJ	ENSMUSG00215051538	rRNA gene	Chr12:110404930-110405035 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042920	rRNA gene	Chr12:110421392-110421497 (+)
CBA/J	ENSMUSG00210043329	rRNA gene	Chr12:110750828-110750933 (+)
DBA/2J	ENSMUSG00185014993	rRNA gene	Chr12:113254810-113254915 (+)
FVB/NJ	ENSMUSG00205005279	rRNA gene	Chr12:111779928-111780033 (+)
JF1/MsJ	ENSUMUG00000034546	rRNA gene	Chr12:117546311-117546416 (+)
LP/J	ENSMUSG00230046715	rRNA gene	Chr12:119629619-119629724 (+)
NOD/ShiLtJ	ENSMUSG00190036320	rRNA gene	Chr12:109260126-109260231 (+)
NZO/HlLtJ	ENSMUSG00225044200	rRNA gene	Chr12:121452541-121452646 (+)
PWK/PhJ	ENSLUMG00010050795	rRNA gene	Chr12:110639667-110639772 (+)
SPRET/EiJ	ENSMSPG00010012028	rRNA gene	Chr12:113401410-113401515 (+)
WSB/EiJ	ENSIUOG00005042135	rRNA gene	Chr12:110076513-110076618 (+)

Homology

• Gene Tree
  Gm54711
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074980 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074980	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020182320	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;