Gm54709 Gene Detail

Summary

• Symbol
  Gm54709
• Name
  predicted gene, 54709

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845896
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:41096332-41096605 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845896	unclassified non-coding RNA gene	Chr18:41096332-41096605 (+)
129S1/SvImJ	ENSMUSG00200045151	unclassified non-coding RNA gene	Chr18:38106459-38106732 (+)
A/J	ENSMUSG00195039313	unclassified non-coding RNA gene	Chr18:38263184-38263457 (+)
AKR/J	ENSMUSG00220017442	unclassified non-coding RNA gene	Chr18:38227596-38227869 (+)
BALB/cJ	ENSMUSG00180021483	unclassified non-coding RNA gene	Chr18:38708693-38708966 (+)
C3H/HeJ	ENSMUSG00175043331	unclassified non-coding RNA gene	Chr18:38222124-38222397 (+)
C57BL/6NJ	ENSMUSG00215030421	unclassified non-coding RNA gene	Chr18:37970615-37970888 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024270	unclassified non-coding RNA gene	Chr18:37847993-37848266 (+)
CBA/J	ENSMUSG00210021695	unclassified non-coding RNA gene	Chr18:38274573-38274846 (+)
DBA/2J	ENSMUSG00185021473	unclassified non-coding RNA gene	Chr18:38183255-38183528 (+)
FVB/NJ	ENSMUSG00205035202	unclassified non-coding RNA gene	Chr18:37879270-37879543 (+)
JF1/MsJ	ENSUMUG00000048185	unclassified non-coding RNA gene	Chr18:38325649-38325922 (+)
LP/J	ENSMUSG00230049291	unclassified non-coding RNA gene	Chr18:40301291-40301564 (+)
NOD/ShiLtJ	ENSMUSG00190023234	unclassified non-coding RNA gene	Chr18:37973143-37973416 (+)
NZO/HlLtJ	ENSMUSG00225047337	unclassified non-coding RNA gene	Chr18:40204053-40204326 (+)
PWK/PhJ	ENSLUMG00010013276	unclassified non-coding RNA gene	Chr18:38469495-38469768 (+)
SPRET/EiJ	ENSMSPG00010023413	unclassified non-coding RNA gene	Chr18:38554734-38555007 (+)
WSB/EiJ	ENSIUOG00005008147	unclassified non-coding RNA gene	Chr18:37957362-37957635 (+)

Homology

• Gene Tree
  Gm54709
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075393 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075393	Ensembl Gene Model | MGI Sequence Detail	274	C57BL/6J
transcript	ENSMUST00020183315	Ensembl | MGI Sequence Detail	274	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;