Gm54706 Gene Detail

Summary

• Symbol
  Gm54706
• Name
  predicted gene, 54706

• Feature Type
  miRNA gene
• IDs
  MGI:6845890
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:8886362-8886471 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845890	miRNA gene	Chr1:8886362-8886471 (+)
129S1/SvImJ	ENSMUSG00200003284	miRNA gene	Chr1:6190881-6190990 (+)
A/J	ENSMUSG00195003278	miRNA gene	Chr1:6003699-6003808 (+)
AKR/J	ENSMUSG00220003599	miRNA gene	Chr1:6124098-6124207 (+)
BALB/cJ	ENSMUSG00180009048	miRNA gene	Chr1:6080966-6081075 (+)
C3H/HeJ	ENSMUSG00175000299	miRNA gene	Chr1:5937753-5937862 (+)
C57BL/6NJ	ENSMUSG00215004180	miRNA gene	Chr1:6070710-6070819 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002087	miRNA gene	Chr1:6434659-6434768 (+)
CBA/J	ENSMUSG00210002124	miRNA gene	Chr1:5802342-5802451 (+)
DBA/2J	ENSMUSG00185004722	miRNA gene	Chr1:6933110-6933219 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000003791	miRNA gene	Chr1:6225913-6226022 (+)
LP/J	ENSMUSG00230002759	miRNA gene	Chr1:6949857-6949966 (+)
NOD/ShiLtJ	ENSMUSG00190001287	miRNA gene	Chr1:6002931-6003040 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010002517	miRNA gene	Chr1:5830263-5830372 (+)
SPRET/EiJ	ENSMSPG00010014731	miRNA gene	Chr1:6359392-6359501 (+)
WSB/EiJ	ENSIUOG00005011210	miRNA gene	Chr1:6005024-6005133 (+)

Homology

• Gene Tree
  Gm54706
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075967 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075967	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182635	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;