Gm54705 Gene Detail

Summary

• Symbol
  Gm54705
• Name
  predicted gene, 54705

• Feature Type
  miRNA gene
• IDs
  MGI:6845888
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:117488960-117489069 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  50

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845888	miRNA gene	Chr1:117488960-117489069 (+)
129S1/SvImJ	ENSMUSG00200012974	miRNA gene	Chr4:24294359-24294468 (-)
129S1/SvImJ	ENSMUSG00200052899	miRNA gene	Chr11:118167536-118167645 (-)
129S1/SvImJ	ENSMUSG00200010360	miRNA gene	Chr5:88122839-88122948 (-)
129S1/SvImJ	ENSMUSG00200004698	miRNA gene	Chr12:57446559-57446668 (-)
129S1/SvImJ	ENSMUSG00200012965	miRNA gene	Chr4:24289802-24289911 (-)
129S1/SvImJ	ENSMUSG00200002085	miRNA gene	Chr1:115028863-115028972 (+)
129S1/SvImJ	ENSMUSG00200052895	miRNA gene	Chr11:118162976-118163085 (-)
A/J	ENSMUSG00195004751	miRNA gene	Chr1:114228636-114228745 (+)
AKR/J	ENSMUSG00220026072	miRNA gene	Chr1:114271622-114271731 (+)
BALB/cJ	ENSMUSG00180013015	miRNA gene	Chr1:114594212-114594321 (+)
C3H/HeJ	ENSMUSG00175025024	miRNA gene	Chr14:11054640-11054749 (+)
C3H/HeJ	ENSMUSG00175020421	miRNA gene	Chr1:114459705-114459814 (+)
C57BL/6NJ	ENSMUSG00215037735	miRNA gene	Chr2:151716300-151716409 (-)
C57BL/6NJ	ENSMUSG00215037712	miRNA gene	Chr2:151707484-151707593 (-)
C57BL/6NJ	ENSMUSG00215010557	miRNA gene	Chr12:58419006-58419115 (-)
C57BL/6NJ	ENSMUSG00215036626	miRNA gene	Chr5:87972372-87972481 (-)
C57BL/6NJ	ENSMUSG00215013257	miRNA gene	Chr1:114494834-114494943 (+)
C57BL/6NJ	ENSMUSG00215047788	miRNA gene	Chr11:117658498-117658607 (-)
C57BL/6NJ	ENSMUSG00215047795	miRNA gene	Chr11:117663058-117663167 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210021168	miRNA gene	ChrX:101049725-101049834 (+)
CBA/J	ENSMUSG00210001405	miRNA gene	Chr1:114347886-114347995 (+)
CBA/J	ENSMUSG00210021163	miRNA gene	ChrX:101040909-101041018 (+)
CBA/J	ENSMUSG00210026111	miRNA gene	Chr7:81259274-81259383 (-)
CBA/J	ENSMUSG00210051033	miRNA gene	Chr11:117802493-117802602 (-)
CBA/J	ENSMUSG00210051024	miRNA gene	Chr11:117807053-117807162 (-)
CBA/J	ENSMUSG00210026106	miRNA gene	Chr7:81254719-81254828 (-)
CBA/J	ENSMUSG00210007013	miRNA gene	Chr5:87999542-87999651 (-)
CBA/J	ENSMUSG00210024011	miRNA gene	Chr5:69496301-69496410 (+)
CBA/J	ENSMUSG00210024013	miRNA gene	Chr5:69501053-69501162 (+)
DBA/2J	ENSMUSG00185028071	miRNA gene	Chr11:118120218-118120327 (-)
DBA/2J	ENSMUSG00185017188	miRNA gene	Chr5:71330860-71330969 (+)
DBA/2J	ENSMUSG00185042163	miRNA gene	Chr5:89936304-89936413 (-)
DBA/2J	ENSMUSG00185041540	miRNA gene	Chr14:11278155-11278264 (+)
DBA/2J	ENSMUSG00185013996	miRNA gene	Chr1:118737238-118737347 (+)
DBA/2J	ENSMUSG00185050129	miRNA gene	Chr2:151920788-151920897 (-)
FVB/NJ	ENSMUSG00205042387	miRNA gene	Chr14:11190205-11190314 (+)
FVB/NJ	ENSMUSG00205042018	miRNA gene	Chr7:81213423-81213532 (-)
FVB/NJ	ENSMUSG00205047833	miRNA gene	Chr11:117963371-117963480 (-)
FVB/NJ	ENSMUSG00205012726	miRNA gene	Chr1:113745279-113745388 (+)
FVB/NJ	ENSMUSG00205037047	miRNA gene	Chr5:86824995-86825104 (-)
FVB/NJ	ENSMUSG00205000577	miRNA gene	Chr4:24162125-24162234 (-)
FVB/NJ	ENSMUSG00205005858	miRNA gene	Chr12:58325038-58325147 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230009101	miRNA gene	Chr1:118122532-118122641 (+)
NOD/ShiLtJ	ENSMUSG00190004776	miRNA gene	Chr5:68424950-68425059 (+)
NOD/ShiLtJ	ENSMUSG00190044297	miRNA gene	Chr5:86903732-86903841 (-)
NOD/ShiLtJ	ENSMUSG00190006905	miRNA gene	Chr1:114347646-114347755 (+)
NOD/ShiLtJ	ENSMUSG00190000687	miRNA gene	Chr4:24517598-24517707 (-)
NZO/HlLtJ	ENSMUSG00225002863	miRNA gene	Chr1:121956368-121956477 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005003252	miRNA gene	Chr1:114096841-114096950 (+)

Homology

• Gene Tree
  Gm54705
  

Sequences &
Gene Models

• All Sequences
  52

• Ensembl
  ENSMUSG00002076328 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076328	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182251	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;