Gm54704 Gene Detail

Summary

• Symbol
  Gm54704
• Name
  predicted gene, 54704

• Feature Type
  miRNA gene
• IDs
  MGI:6845886
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:8658839-8658948 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  31

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845886	miRNA gene	Chr1:8658839-8658948 (-)
129S1/SvImJ	ENSMUSG00200036454	miRNA gene	Chr15:89780642-89780749 (+)
129S1/SvImJ	ENSMUSG00200003416	miRNA gene	Chr1:5976589-5976698 (-)
A/J	ENSMUSG00195003334	miRNA gene	Chr1:5789242-5789351 (-)
A/J	ENSMUSG00195021519	miRNA gene	Chr15:89677803-89677910 (+)
AKR/J	ENSMUSG00220033489	miRNA gene	Chr15:89716092-89716199 (+)
AKR/J	ENSMUSG00220004378	miRNA gene	Chr1:5905322-5905431 (-)
BALB/cJ	ENSMUSG00180009460	miRNA gene	Chr1:5866545-5866654 (-)
BALB/cJ	ENSMUSG00180016159	miRNA gene	Chr15:89558413-89558520 (+)
C3H/HeJ	ENSMUSG00175000462	miRNA gene	Chr1:5700308-5700417 (-)
C3H/HeJ	ENSMUSG00175030425	miRNA gene	Chr15:89864250-89864357 (+)
C57BL/6NJ	ENSMUSG00215004438	miRNA gene	Chr1:5843126-5843235 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002292	miRNA gene	Chr1:6199717-6199826 (-)
CBA/J	ENSMUSG00210013389	miRNA gene	Chr15:89645646-89645753 (+)
CBA/J	ENSMUSG00210002172	miRNA gene	Chr1:5564909-5565018 (-)
DBA/2J	ENSMUSG00185023420	miRNA gene	Chr15:89693797-89693904 (+)
DBA/2J	ENSMUSG00185004768	miRNA gene	Chr1:6705724-6705833 (-)
FVB/NJ	ENSMUSG00205039856	miRNA gene	Chr15:89399878-89399985 (+)
FVB/NJ	ENSMUSG00205005515	miRNA gene	Chr1:5974464-5974573 (-)
JF1/MsJ	ENSUMUG00000004768	miRNA gene	Chr1:6015232-6015341 (-)
JF1/MsJ	ENSUMUG00000008023	miRNA gene	Chr12:21206001-21206107 (-)
LP/J	ENSMUSG00230002768	miRNA gene	Chr1:6734511-6734620 (-)
LP/J	ENSMUSG00230041993	miRNA gene	Chr15:93018614-93018721 (+)
NOD/ShiLtJ	ENSMUSG00190032609	miRNA gene	Chr15:89687758-89687865 (+)
NOD/ShiLtJ	ENSMUSG00190001605	miRNA gene	Chr1:5788657-5788766 (-)
NZO/HlLtJ	ENSMUSG00225000272	miRNA gene	Chr1:10114478-10114587 (-)
NZO/HlLtJ	ENSMUSG00225044541	miRNA gene	Chr15:93315867-93315974 (+)
PWK/PhJ	ENSLUMG00010036895	miRNA gene	Chr15:89345735-89345842 (+)
PWK/PhJ	ENSLUMG00010002749	miRNA gene	Chr1:5622669-5622778 (-)
SPRET/EiJ	ENSMSPG00010014854	miRNA gene	Chr1:6172710-6172819 (-)
WSB/EiJ	ENSIUOG00005011687	miRNA gene	Chr1:5777466-5777575 (-)

Homology

• Gene Tree
  Gm54704
  

Sequences &
Gene Models

• All Sequences
  33

• Ensembl
  ENSMUSG00002074990 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074990	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182074	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;