Gm54700 Gene Detail

Summary

• Symbol
  Gm54700
• Name
  predicted gene, 54700

• Feature Type
  miRNA gene
• IDs
  MGI:6845878
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:99949034-99949111 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845878	miRNA gene	Chr12:99949034-99949111 (-)
129S1/SvImJ	ENSMUSG00200017995	miRNA gene	Chr12:91721801-91721878 (-)
A/J	ENSMUSG00195022854	miRNA gene	Chr12:94284047-94284124 (-)
AKR/J	ENSMUSG00220017914	miRNA gene	Chr12:92176089-92176166 (-)
BALB/cJ	ENSMUSG00180039247	miRNA gene	Chr12:93435020-93435097 (-)
C3H/HeJ	ENSMUSG00175034605	miRNA gene	Chr12:96097090-96097167 (-)
C57BL/6NJ	ENSMUSG00215042236	miRNA gene	Chr12:92746243-92746320 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006245	miRNA gene	Chr12:92381972-92382049 (-)
CBA/J	ENSMUSG00210014973	miRNA gene	Chr12:93093949-93094026 (-)
DBA/2J	ENSMUSG00185048083	miRNA gene	Chr12:94883280-94883357 (-)
FVB/NJ	ENSMUSG00205019476	miRNA gene	Chr12:92255954-92256031 (-)
JF1/MsJ	ENSUMUG00000025869	miRNA gene	Chr12:99608112-99608189 (-)
LP/J	ENSMUSG00230004918	miRNA gene	Chr12:101986925-101987002 (-)
NOD/ShiLtJ	ENSMUSG00190005216	miRNA gene	Chr12:93053091-93053168 (+)
NZO/HlLtJ	ENSMUSG00225033961	miRNA gene	Chr12:103703846-103703923 (-)
PWK/PhJ	ENSLUMG00010014201	miRNA gene	Chr12:93096911-93096988 (-)
SPRET/EiJ	ENSMSPG00010020369	miRNA gene	Chr12:95525309-95525386 (-)
WSB/EiJ	ENSIUOG00005002207	miRNA gene	Chr12:92082235-92082312 (-)

Homology

• Gene Tree
  Gm54700
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075118 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075118	Ensembl Gene Model | MGI Sequence Detail	78	C57BL/6J
transcript	ENSMUST00020182281	Ensembl | MGI Sequence Detail	78	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;