Gm54698 Gene Detail

Summary

• Symbol
  Gm54698
• Name
  predicted gene, 54698

• Feature Type
  miRNA gene
• IDs
  MGI:6845874
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:75818704-75818807 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845874	miRNA gene	Chr9:75818704-75818807 (+)
129S1/SvImJ	ENSMUSG00200019955	miRNA gene	Chr9:72923571-72923674 (+)
A/J	ENSMUSG00195011126	miRNA gene	Chr9:72694333-72694436 (+)
AKR/J	ENSMUSG00220015566	miRNA gene	Chr9:72820748-72820851 (+)
BALB/cJ	ENSMUSG00180021147	miRNA gene	Chr9:72806920-72807023 (+)
C3H/HeJ	ENSMUSG00175012467	miRNA gene	Chr9:72842788-72842891 (+)
C57BL/6NJ	ENSMUSG00215019532	miRNA gene	Chr9:72772942-72773045 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009801	miRNA gene	Chr9:72531767-72531869 (+)
CBA/J	ENSMUSG00210013425	miRNA gene	Chr9:72897282-72897385 (+)
DBA/2J	ENSMUSG00185008034	miRNA gene	Chr9:72927717-72927820 (+)
FVB/NJ	ENSMUSG00205032118	miRNA gene	Chr9:73214941-73215044 (+)
JF1/MsJ	ENSUMUG00000043342	miRNA gene	Chr9:72922455-72922531 (+)
LP/J	ENSMUSG00230025214	miRNA gene	Chr9:73100393-73100496 (+)
NOD/ShiLtJ	ENSMUSG00190036926	miRNA gene	Chr9:73022479-73022582 (+)
NZO/HlLtJ	ENSMUSG00225026252	miRNA gene	Chr9:73225213-73225316 (+)
PWK/PhJ	ENSLUMG00010016826	miRNA gene	Chr9:72844934-72845013 (+)
SPRET/EiJ	ENSMSPG00010004117	miRNA gene	Chr9:73992424-73992520 (+)
WSB/EiJ	ENSIUOG00005027423	miRNA gene	Chr9:72392052-72392155 (+)

Homology

• Gene Tree
  Gm54698
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076790 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076790	Ensembl Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	ENSMUST00020181748	Ensembl | MGI Sequence Detail	104	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;