Gm54697 Gene Detail

Summary

• Symbol
  Gm54697
• Name
  predicted gene, 54697

• Feature Type
  rRNA gene
• IDs
  MGI:6845872
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:158232273-158232381 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845872	rRNA gene	ChrX:158232273-158232381 (+)
129S1/SvImJ	ENSMUSG00200027017	rRNA gene	ChrX:134953808-134953916 (+)
A/J	ENSMUSG00195038642	rRNA gene	ChrX:140077116-140077224 (+)
AKR/J	ENSMUSG00220031500	rRNA gene	ChrX:131933191-131933299 (+)
BALB/cJ	ENSMUSG00180042261	rRNA gene	ChrX:135443833-135443941 (+)
C3H/HeJ	ENSMUSG00175027008	rRNA gene	ChrX:140014924-140015032 (+)
C57BL/6NJ	ENSMUSG00215024625	rRNA gene	ChrX:135847135-135847243 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034137	rRNA gene	ChrX:137625408-137625517 (+)
CBA/J	ENSMUSG00210038330	rRNA gene	ChrX:137337410-137337518 (+)
DBA/2J	ENSMUSG00185046564	rRNA gene	ChrX:152283356-152283464 (+)
FVB/NJ	ENSMUSG00205033907	rRNA gene	ChrX:135953038-135953146 (+)
JF1/MsJ	ENSUMUG00000037876	rRNA gene	ChrX:172705487-172705596 (+)
LP/J	ENSMUSG00230014662	rRNA gene	ChrX:159073269-159073377 (+)
NOD/ShiLtJ	ENSMUSG00190035185	rRNA gene	ChrX:136422897-136423005 (+)
NZO/HlLtJ	ENSMUSG00225042214	rRNA gene	ChrX:162462476-162462584 (+)
PWK/PhJ	ENSLUMG00010043328	rRNA gene	ChrX:133798123-133798232 (+)
SPRET/EiJ	ENSMSPG00010020088	rRNA gene	ChrX:138867488-138867597 (+)
WSB/EiJ	ENSIUOG00005025839	rRNA gene	ChrX:136760927-136761035 (+)

Homology

• Gene Tree
  Gm54697
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075682 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075682	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020183110	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;