Gm54696 Gene Detail

Summary

• Symbol
  Gm54696
• Name
  predicted gene, 54696

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845870
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:32404884-32405201 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845870	unclassified non-coding RNA gene	Chr12:32404884-32405201 (-)
129S1/SvImJ	ENSMUSG00200015787	unclassified non-coding RNA gene	Chr12:24215963-24216280 (-)
A/J	ENSMUSG00195023237	unclassified non-coding RNA gene	Chr12:26897911-26898228 (-)
AKR/J	ENSMUSG00220032441	unclassified non-coding RNA gene	Chr12:24866358-24866675 (-)
BALB/cJ	ENSMUSG00180027376	unclassified non-coding RNA gene	Chr12:25897054-25897371 (-)
C3H/HeJ	ENSMUSG00175022501	unclassified non-coding RNA gene	Chr12:28930365-28930682 (-)
C57BL/6NJ	ENSMUSG00215024608	unclassified non-coding RNA gene	Chr12:25331483-25331800 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010920	unclassified non-coding RNA gene	Chr12:25727573-25727891 (-)
CBA/J	ENSMUSG00210008520	unclassified non-coding RNA gene	Chr12:25419606-25419923 (-)
DBA/2J	ENSMUSG00185015526	unclassified non-coding RNA gene	Chr12:27444621-27444938 (-)
FVB/NJ	ENSMUSG00205006748	unclassified non-coding RNA gene	Chr12:25470380-25470697 (-)
JF1/MsJ	ENSUMUG00000011204	unclassified non-coding RNA gene	Chr12:31639660-31639978 (-)
LP/J	ENSMUSG00230024651	unclassified non-coding RNA gene	Chr12:34404641-34404958 (-)
NOD/ShiLtJ	ENSMUSG00190019259	unclassified non-coding RNA gene	Chr12:24381320-24381637 (-)
NZO/HlLtJ	ENSMUSG00225031862	unclassified non-coding RNA gene	Chr12:36599305-36599622 (-)
PWK/PhJ	ENSLUMG00010011337	unclassified non-coding RNA gene	Chr12:25886304-25886622 (-)
SPRET/EiJ	ENSMSPG00010006009	unclassified non-coding RNA gene	Chr12:26386320-26386638 (-)
WSB/EiJ	ENSIUOG00005022085	unclassified non-coding RNA gene	Chr12:25106178-25106495 (-)

Homology

• Gene Tree
  Gm54696
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076203 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076203	Ensembl Gene Model | MGI Sequence Detail	318	C57BL/6J
transcript	ENSMUST00020182679	Ensembl | MGI Sequence Detail	318	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;