Gm54690 Gene Detail

Summary

• Symbol
  Gm54690
• Name
  predicted gene, 54690

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845858
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:38727211-38727281 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845858	unclassified non-coding RNA gene	Chr18:38727211-38727281 (+)
129S1/SvImJ	ENSMUSG00200044539	unclassified non-coding RNA gene	Chr18:35725020-35725090 (+)
A/J	ENSMUSG00195037765	unclassified non-coding RNA gene	Chr18:35877626-35877696 (+)
AKR/J	ENSMUSG00220017303	unclassified non-coding RNA gene	Chr18:35845638-35845708 (+)
BALB/cJ	ENSMUSG00180022451	unclassified non-coding RNA gene	Chr18:36327233-36327303 (+)
C3H/HeJ	ENSMUSG00175041420	unclassified non-coding RNA gene	Chr18:35842983-35843053 (+)
C57BL/6NJ	ENSMUSG00215031477	unclassified non-coding RNA gene	Chr18:35597370-35597440 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024156	unclassified non-coding RNA gene	Chr18:35464351-35464421 (+)
CBA/J	ENSMUSG00210021948	unclassified non-coding RNA gene	Chr18:35869219-35869289 (+)
DBA/2J	ENSMUSG00185020935	unclassified non-coding RNA gene	Chr18:35803804-35803874 (+)
FVB/NJ	ENSMUSG00205036624	unclassified non-coding RNA gene	Chr18:35513211-35513281 (+)
JF1/MsJ	ENSUMUG00000048687	unclassified non-coding RNA gene	Chr18:35943782-35943852 (+)
LP/J	ENSMUSG00230049151	unclassified non-coding RNA gene	Chr18:37919104-37919174 (+)
NOD/ShiLtJ	ENSMUSG00190022866	unclassified non-coding RNA gene	Chr18:35591321-35591391 (+)
NZO/HlLtJ	ENSMUSG00225047165	unclassified non-coding RNA gene	Chr18:37825910-37825980 (+)
PWK/PhJ	ENSLUMG00010013321	unclassified non-coding RNA gene	Chr18:36091336-36091406 (+)
SPRET/EiJ	ENSMSPG00010022618	unclassified non-coding RNA gene	Chr18:36112794-36112864 (+)
WSB/EiJ	ENSIUOG00005008317	unclassified non-coding RNA gene	Chr18:35585427-35585497 (+)

Homology

• Gene Tree
  Gm54690
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075777 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075777	Ensembl Gene Model | MGI Sequence Detail	71	C57BL/6J
transcript	ENSMUST00020181808	Ensembl | MGI Sequence Detail	71	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;