Gm54684 Gene Detail

Summary

• Symbol
  Gm54684
• Name
  predicted gene, 54684

• Feature Type
  snRNA gene
• IDs
  MGI:6845846
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:36362192-36362297 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845846	snRNA gene	Chr19:36362192-36362297 (-)
129S1/SvImJ	ENSMUSG00200031996	snRNA gene	Chr19:33131732-33131837 (-)
A/J	ENSMUSG00195011801	snRNA gene	Chr19:33252673-33252778 (-)
AKR/J	ENSMUSG00220019185	snRNA gene	Chr19:33136548-33136653 (-)
BALB/cJ	ENSMUSG00180032794	snRNA gene	Chr19:33581457-33581562 (-)
C3H/HeJ	ENSMUSG00175041584	snRNA gene	Chr19:33008712-33008817 (-)
C57BL/6NJ	ENSMUSG00215034289	snRNA gene	Chr19:33026562-33026667 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015832	snRNA gene	Chr19:32676408-32676512 (-)
CBA/J	ENSMUSG00210037844	snRNA gene	Chr19:33088013-33088118 (-)
DBA/2J	ENSMUSG00185034592	snRNA gene	Chr19:33608193-33608298 (-)
FVB/NJ	ENSMUSG00205008004	snRNA gene	Chr19:32860388-32860493 (-)
JF1/MsJ	ENSUMUG00000050228	snRNA gene	Chr19:33739269-33739374 (-)
LP/J	ENSMUSG00230036106	snRNA gene	Chr19:34419113-34419218 (-)
NOD/ShiLtJ	ENSMUSG00190011987	snRNA gene	Chr19:32992042-32992147 (-)
NZO/HlLtJ	ENSMUSG00225029502	snRNA gene	Chr19:37975871-37975976 (-)
PWK/PhJ	ENSLUMG00010001459	snRNA gene	Chr19:33126714-33126818 (-)
SPRET/EiJ	ENSMSPG00010025207	snRNA gene	Chr19:32841532-32841637 (-)
WSB/EiJ	ENSIUOG00005038229	snRNA gene	Chr19:32503153-32503258 (-)

Homology

• Gene Tree
  Gm54684
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076963 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076963	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020183153	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;