Gm54682 Gene Detail

Summary

• Symbol
  Gm54682
• Name
  predicted gene, 54682

• Feature Type
  rRNA gene
• IDs
  MGI:6845842
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:33589752-33589882 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845842	rRNA gene	Chr15:33589752-33589882 (-)
129S1/SvImJ	ENSMUSG00200028349	rRNA gene	Chr15:30617864-30617994 (-)
A/J	ENSMUSG00195014586	rRNA gene	Chr15:30510090-30510220 (-)
AKR/J	ENSMUSG00220047329	rRNA gene	Chr15:30412418-30412548 (-)
BALB/cJ	ENSMUSG00180005619	rRNA gene	Chr15:30466760-30466890 (-)
C3H/HeJ	ENSMUSG00175004709	rRNA gene	Chr15:30655156-30655286 (-)
C57BL/6NJ	ENSMUSG00215005143	rRNA gene	Chr15:30497827-30497957 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015188	rRNA gene	Chr15:30519530-30519660 (-)
CBA/J	ENSMUSG00210024781	rRNA gene	Chr15:30605807-30605937 (-)
DBA/2J	ENSMUSG00185023664	rRNA gene	Chr15:30590524-30590654 (-)
FVB/NJ	ENSMUSG00205014387	rRNA gene	Chr15:30471795-30471925 (-)
JF1/MsJ	ENSUMUG00000013823	rRNA gene	Chr15:30536810-30536940 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190012735	rRNA gene	Chr15:30573358-30573488 (-)
NZO/HlLtJ	ENSMUSG00225032291	rRNA gene	Chr15:34280146-34280276 (-)
PWK/PhJ	ENSLUMG00010021941	rRNA gene	Chr15:30687460-30687590 (-)
SPRET/EiJ	ENSMSPG00010024038	rRNA gene	Chr15:31263912-31264042 (-)
WSB/EiJ	ENSIUOG00005021045	rRNA gene	Chr15:30601639-30601769 (-)

Homology

• Gene Tree
  Gm54682
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076175 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076175	Ensembl Gene Model | MGI Sequence Detail	131	C57BL/6J
transcript	ENSMUST00020182275	Ensembl | MGI Sequence Detail	131	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;