Gm54679 Gene Detail

Summary

• Symbol
  Gm54679
• Name
  predicted gene, 54679

• Feature Type
  rRNA gene
• IDs
  MGI:6845836
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:69307058-69307191 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845836	rRNA gene	Chr18:69307058-69307191 (-)
129S1/SvImJ	ENSMUSG00200026064	rRNA gene	Chr18:66533918-66534051 (-)
A/J	ENSMUSG00195034331	rRNA gene	Chr18:66562528-66562661 (-)
AKR/J	ENSMUSG00220023600	rRNA gene	Chr18:66507547-66507680 (-)
BALB/cJ	ENSMUSG00180012488	rRNA gene	Chr18:67129542-67129675 (-)
C3H/HeJ	ENSMUSG00175010527	rRNA gene	Chr18:66715694-66715827 (-)
C57BL/6NJ	ENSMUSG00215021757	rRNA gene	Chr18:66067615-66067748 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015867	rRNA gene	Chr18:65716711-65716844 (-)
CBA/J	ENSMUSG00210031778	rRNA gene	Chr18:66673851-66673984 (-)
DBA/2J	ENSMUSG00185031322	rRNA gene	Chr18:66579816-66579949 (-)
FVB/NJ	ENSMUSG00205013919	rRNA gene	Chr18:66044947-66045080 (-)
JF1/MsJ	ENSUMUG00000044747	rRNA gene	Chr18:66504408-66504541 (-)
LP/J	ENSMUSG00230040894	rRNA gene	Chr18:68662593-68662726 (-)
NOD/ShiLtJ	ENSMUSG00190008257	rRNA gene	Chr18:66307796-66307929 (-)
NZO/HlLtJ	ENSMUSG00225031211	rRNA gene	Chr18:68514695-68514828 (-)
PWK/PhJ	ENSLUMG00010027729	rRNA gene	Chr18:66915712-66915845 (-)
SPRET/EiJ	ENSMSPG00010040059	rRNA gene	Chr18:67085339-67085472 (-)
WSB/EiJ	ENSIUOG00005006586	rRNA gene	Chr18:66129773-66129906 (-)

Homology

• Gene Tree
  Gm54679
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075616 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075616	Ensembl Gene Model | MGI Sequence Detail	134	C57BL/6J
transcript	ENSMUST00020183191	Ensembl | MGI Sequence Detail	134	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;