Gm54678 Gene Detail

Summary

• Symbol
  Gm54678
• Name
  predicted gene, 54678

• Feature Type
  miRNA gene
• IDs
  MGI:6845834
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:116206124-116206187 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845834	miRNA gene	Chr12:116206124-116206187 (-)
129S1/SvImJ	ENSMUSG00200028965	miRNA gene	Chr12:108572715-108572770 (-)
A/J	ENSMUSG00195048338	miRNA gene	Chr12:111273908-111273963 (-)
AKR/J	ENSMUSG00220038960	miRNA gene	Chr12:108361581-108361636 (-)
BALB/cJ	ENSMUSG00180051852	miRNA gene	Chr12:111078110-111078165 (-)
C3H/HeJ	ENSMUSG00175050661	miRNA gene	Chr12:112127554-112127609 (-)
C57BL/6NJ	ENSMUSG00215050148	miRNA gene	Chr12:109074058-109074121 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041481	miRNA gene	Chr12:109103509-109103564 (-)
CBA/J	ENSMUSG00210041206	miRNA gene	Chr12:109404257-109404312 (-)
DBA/2J	ENSMUSG00185015209	miRNA gene	Chr12:111908967-111909022 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000034501	miRNA gene	Chr12:116207725-116207788 (-)
LP/J	ENSMUSG00230046677	miRNA gene	Chr12:118298812-118298875 (-)
NOD/ShiLtJ	ENSMUSG00190030152	miRNA gene	Chr12:107935271-107935334 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010050210	miRNA gene	Chr12:109263841-109263904 (-)
SPRET/EiJ	ENSMSPG00010011854	miRNA gene	Chr12:112094564-112094626 (-)
WSB/EiJ	ENSIUOG00005042375	miRNA gene	Chr12:108759655-108759710 (-)

Homology

• Gene Tree
  Gm54678
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075267 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075267	Ensembl Gene Model | MGI Sequence Detail	64	C57BL/6J
transcript	ENSMUST00020182450	Ensembl | MGI Sequence Detail	64	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;