Gm54677 Gene Detail

Summary

• Symbol
  Gm54677
• Name
  predicted gene, 54677

• Feature Type
  rRNA gene
• IDs
  MGI:6845832
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:35583074-35583204 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845832	rRNA gene	Chr19:35583074-35583204 (-)
129S1/SvImJ	ENSMUSG00200031327	rRNA gene	Chr19:32352277-32352407 (-)
A/J	ENSMUSG00195011720	rRNA gene	Chr19:32473206-32473336 (-)
AKR/J	ENSMUSG00220019418	rRNA gene	Chr19:32366744-32366874 (-)
BALB/cJ	ENSMUSG00180032661	rRNA gene	Chr19:32801994-32802124 (-)
C3H/HeJ	ENSMUSG00175042210	rRNA gene	Chr19:32220349-32220479 (-)
C57BL/6NJ	ENSMUSG00215033987	rRNA gene	Chr19:32247120-32247250 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015987	rRNA gene	Chr19:31898571-31898701 (-)
CBA/J	ENSMUSG00210038962	rRNA gene	Chr19:32297693-32297823 (-)
DBA/2J	ENSMUSG00185034930	rRNA gene	Chr19:32828687-32828817 (-)
FVB/NJ	ENSMUSG00205007634	rRNA gene	Chr19:32084083-32084213 (-)
JF1/MsJ	ENSUMUG00000049501	rRNA gene	Chr19:32968805-32968936 (-)
LP/J	ENSMUSG00230036496	rRNA gene	Chr19:33639726-33639856 (-)
NOD/ShiLtJ	ENSMUSG00190012085	rRNA gene	Chr19:32197962-32198092 (-)
NZO/HlLtJ	ENSMUSG00225029622	rRNA gene	Chr19:37201601-37201731 (-)
PWK/PhJ	ENSLUMG00010001350	rRNA gene	Chr19:32340997-32341127 (-)
SPRET/EiJ	ENSMSPG00010023409	rRNA gene	Chr19:32055396-32055526 (-)
WSB/EiJ	ENSIUOG00005038938	rRNA gene	Chr19:31720963-31721093 (-)

Homology

• Gene Tree
  Gm54677
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076303 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076303	Ensembl Gene Model | MGI Sequence Detail	131	C57BL/6J
transcript	ENSMUST00020183284	Ensembl | MGI Sequence Detail	131	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;