Gm54675 Gene Detail

Summary

• Symbol
  Gm54675
• Name
  predicted gene, 54675

• Feature Type
  miRNA gene
• IDs
  MGI:6845828
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:116115721-116115841 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845828	miRNA gene	Chr12:116115721-116115841 (-)
129S1/SvImJ	ENSMUSG00200028864	miRNA gene	Chr12:108483695-108483815 (-)
A/J	ENSMUSG00195048034	miRNA gene	Chr12:111184851-111184977 (-)
AKR/J	ENSMUSG00220038985	miRNA gene	Chr12:108260487-108260613 (-)
BALB/cJ	ENSMUSG00180050568	miRNA gene	Chr12:110989096-110989216 (-)
C3H/HeJ	ENSMUSG00175046730	miRNA gene	Chr12:112038515-112038629 (-)
C57BL/6NJ	ENSMUSG00215051267	miRNA gene	Chr12:108983661-108983784 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042529	miRNA gene	Chr12:109009117-109009246 (-)
CBA/J	ENSMUSG00210031900	miRNA gene	Chr12:109315200-109315314 (-)
DBA/2J	ENSMUSG00185014857	miRNA gene	Chr12:111819396-111819534 (-)
FVB/NJ	ENSMUSG00205045370	miRNA gene	Chr12:110348539-110348662 (-)
JF1/MsJ	ENSUMUG00000030453	miRNA gene	Chr12:116111307-116111436 (-)
LP/J	ENSMUSG00230045979	miRNA gene	Chr12:118208429-118208549 (-)
NOD/ShiLtJ	ENSMUSG00190035505	miRNA gene	Chr12:107844857-107844977 (-)
NZO/HlLtJ	ENSMUSG00225044098	miRNA gene	Chr12:120048194-120048320 (-)
PWK/PhJ	ENSLUMG00010049334	miRNA gene	Chr12:109169918-109170044 (-)
SPRET/EiJ	ENSMSPG00010011825	miRNA gene	Chr12:111989159-111989277 (-)
WSB/EiJ	ENSIUOG00005041898	miRNA gene	Chr12:108663090-108663207 (-)

Homology

• Gene Tree
  Gm54675
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076861 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076861	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182914	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;