Gm54673 Gene Detail

Summary

• Symbol
  Gm54673
• Name
  predicted gene, 54673

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845824
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:83541884-83542181 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845824	unclassified non-coding RNA gene	Chr3:83541884-83542181 (-)
129S1/SvImJ	ENSMUSG00200019363	unclassified non-coding RNA gene	Chr3:80385699-80385996 (-)
A/J	ENSMUSG00195012129	unclassified non-coding RNA gene	Chr3:80413924-80414221 (-)
AKR/J	ENSMUSG00220001546	unclassified non-coding RNA gene	Chr3:80358686-80358983 (-)
BALB/cJ	ENSMUSG00180001954	unclassified non-coding RNA gene	Chr3:80531408-80531705 (-)
C3H/HeJ	ENSMUSG00175007884	unclassified non-coding RNA gene	Chr3:80340966-80341263 (-)
C57BL/6NJ	ENSMUSG00215002042	unclassified non-coding RNA gene	Chr3:80782551-80782848 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002054	unclassified non-coding RNA gene	Chr3:79876633-79876930 (-)
CBA/J	ENSMUSG00210026101	unclassified non-coding RNA gene	Chr3:80485186-80485483 (-)
DBA/2J	ENSMUSG00185012827	unclassified non-coding RNA gene	Chr3:80616079-80616376 (-)
FVB/NJ	ENSMUSG00205006567	unclassified non-coding RNA gene	Chr3:79403720-79404017 (-)
JF1/MsJ	ENSUMUG00000002364	unclassified non-coding RNA gene	Chr3:80172763-80173064 (-)
LP/J	ENSMUSG00230036857	unclassified non-coding RNA gene	Chr3:82588168-82588465 (-)
NOD/ShiLtJ	ENSMUSG00190002896	unclassified non-coding RNA gene	Chr3:80860210-80860507 (-)
NZO/HlLtJ	ENSMUSG00225007859	unclassified non-coding RNA gene	Chr3:85341558-85341855 (-)
PWK/PhJ	ENSLUMG00010006819	unclassified non-coding RNA gene	Chr3:80232089-80232384 (-)
SPRET/EiJ	ENSMSPG00010050311	unclassified non-coding RNA gene	Chr3:81030763-81031056 (-)
WSB/EiJ	ENSIUOG00005003179	unclassified non-coding RNA gene	Chr3:80836247-80836544 (-)

Homology

• Gene Tree
  Gm54673
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074954 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074954	Ensembl Gene Model | MGI Sequence Detail	298	C57BL/6J
transcript	ENSMUST00020183311	Ensembl | MGI Sequence Detail	298	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;