Gm54660 Gene Detail

Summary

• Symbol
  Gm54660
• Name
  predicted gene, 54660

• Feature Type
  miRNA gene
• IDs
  MGI:6845798
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:34373047-34373155 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845798	miRNA gene	Chr19:34373047-34373155 (-)
129S1/SvImJ	ENSMUSG00200032587	miRNA gene	Chr19:31092853-31092961 (-)
A/J	ENSMUSG00195011954	miRNA gene	Chr19:31259445-31259562 (-)
AKR/J	ENSMUSG00220018827	miRNA gene	Chr19:31155772-31155880 (-)
BALB/cJ	ENSMUSG00180032685	miRNA gene	Chr19:31588305-31588422 (-)
C3H/HeJ	ENSMUSG00175044025	miRNA gene	Chr19:30985117-30985225 (-)
C57BL/6NJ	ENSMUSG00215028810	miRNA gene	Chr19:31011815-31011923 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015686	miRNA gene	Chr19:30644671-30644778 (-)
CBA/J	ENSMUSG00210037088	miRNA gene	Chr19:31038146-31038254 (-)
DBA/2J	ENSMUSG00185034687	miRNA gene	Chr19:31593417-31593525 (-)
FVB/NJ	ENSMUSG00205007838	miRNA gene	Chr19:30832362-30832469 (-)
JF1/MsJ	ENSUMUG00000049832	miRNA gene	Chr19:31763396-31763503 (-)
LP/J	ENSMUSG00230036560	miRNA gene	Chr19:32380237-32380345 (-)
NOD/ShiLtJ	ENSMUSG00190011833	miRNA gene	Chr19:30963381-30963489 (-)
NZO/HlLtJ	ENSMUSG00225029640	miRNA gene	Chr19:35972132-35972239 (-)
PWK/PhJ	ENSLUMG00010001274	miRNA gene	Chr19:31128619-31128727 (-)
SPRET/EiJ	ENSMSPG00010025647	miRNA gene	Chr19:30766967-30767048 (-)
WSB/EiJ	ENSIUOG00005038426	miRNA gene	Chr19:30498819-30498926 (-)

Homology

• Gene Tree
  Gm54660
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076079 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076079	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020183363	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;