Gm54657 Gene Detail

Summary

• Symbol
  Gm54657
• Name
  predicted gene, 54657

• Feature Type
  miRNA gene
• IDs
  MGI:6845792
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:115462639-115462714 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845792	miRNA gene	Chr12:115462639-115462714 (-)
129S1/SvImJ	ENSMUSG00200029575	miRNA gene	Chr12:107601383-107601458 (-)
A/J	no annotation
AKR/J	ENSMUSG00220040464	miRNA gene	Chr12:107578364-107578439 (-)
BALB/cJ	ENSMUSG00180052900	miRNA gene	Chr12:110653383-110653458 (-)
C3H/HeJ	ENSMUSG00175050691	miRNA gene	Chr12:111369268-111369343 (-)
C57BL/6NJ	ENSMUSG00215048959	miRNA gene	Chr12:108330552-108330627 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044149	miRNA gene	Chr12:108551018-108551093 (-)
CBA/J	ENSMUSG00210042847	miRNA gene	Chr12:108645460-108645535 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000026416	miRNA gene	Chr12:115199105-115199180 (-)
LP/J	ENSMUSG00230048553	miRNA gene	Chr12:117554481-117554556 (-)
NOD/ShiLtJ	ENSMUSG00190038669	miRNA gene	Chr12:107168892-107168967 (-)
NZO/HlLtJ	ENSMUSG00225044410	miRNA gene	Chr12:119380871-119380946 (-)
PWK/PhJ	ENSLUMG00010050924	miRNA gene	Chr12:108676371-108676446 (-)
SPRET/EiJ	ENSMSPG00010011889	miRNA gene	Chr12:111579768-111579843 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54657
  

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00002075484 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075484	Ensembl Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	ENSMUST00020183473	Ensembl | MGI Sequence Detail	76	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;