Gm54654 Gene Detail

Summary

• Symbol
  Gm54654
• Name
  predicted gene, 54654

• Feature Type
  snoRNA gene
• IDs
  MGI:6845786
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:67595412-67595545 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845786	snoRNA gene	Chr18:67595412-67595545 (+)
129S1/SvImJ	ENSMUSG00200025546	snoRNA gene	Chr18:64792061-64792194 (+)
A/J	ENSMUSG00195033739	snoRNA gene	Chr18:64834796-64834929 (+)
AKR/J	ENSMUSG00220023606	snoRNA gene	Chr18:64806487-64806620 (+)
BALB/cJ	ENSMUSG00180012605	snoRNA gene	Chr18:65401909-65402042 (+)
C3H/HeJ	ENSMUSG00175010756	snoRNA gene	Chr18:65009265-65009398 (+)
C57BL/6NJ	ENSMUSG00215024986	snoRNA gene	Chr18:64355179-64355312 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015980	snoRNA gene	Chr18:64001616-64001749 (+)
CBA/J	ENSMUSG00210032234	snoRNA gene	Chr18:64962269-64962402 (+)
DBA/2J	ENSMUSG00185030218	snoRNA gene	Chr18:64873594-64873727 (+)
FVB/NJ	ENSMUSG00205014615	snoRNA gene	Chr18:64335563-64335696 (+)
JF1/MsJ	ENSUMUG00000045102	snoRNA gene	Chr18:64787641-64787774 (+)
LP/J	ENSMUSG00230039299	snoRNA gene	Chr18:66924498-66924631 (+)
NOD/ShiLtJ	ENSMUSG00190008487	snoRNA gene	Chr18:64595370-64595503 (+)
NZO/HlLtJ	ENSMUSG00225030436	snoRNA gene	Chr18:66812776-66812909 (+)
PWK/PhJ	ENSLUMG00010026573	snoRNA gene	Chr18:65177572-65177705 (+)
SPRET/EiJ	ENSMSPG00010038330	snoRNA gene	Chr18:65339913-65340046 (+)
WSB/EiJ	ENSIUOG00005006450	snoRNA gene	Chr18:64406557-64406690 (+)

Homology

• Gene Tree
  Gm54654
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076292 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076292	Ensembl Gene Model | MGI Sequence Detail	134	C57BL/6J
transcript	ENSMUST00020183221	Ensembl | MGI Sequence Detail	134	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;