Gm54653 Gene Detail

Summary

• Symbol
  Gm54653
• Name
  predicted gene, 54653

• Feature Type
  miRNA gene
• IDs
  MGI:6845784
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:34046331-34046454 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845784	miRNA gene	Chr19:34046331-34046454 (+)
129S1/SvImJ	ENSMUSG00200032680	miRNA gene	Chr19:30766101-30766224 (+)
A/J	ENSMUSG00195011972	miRNA gene	Chr19:30933518-30933641 (+)
AKR/J	ENSMUSG00220019204	miRNA gene	Chr19:30828963-30829086 (+)
BALB/cJ	ENSMUSG00180034325	miRNA gene	Chr19:31262373-31262496 (+)
C3H/HeJ	ENSMUSG00175042711	miRNA gene	Chr19:30658346-30658467 (+)
C57BL/6NJ	ENSMUSG00215030748	miRNA gene	Chr19:30685035-30685158 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015945	miRNA gene	Chr19:30328069-30328205 (+)
CBA/J	ENSMUSG00210037684	miRNA gene	Chr19:30711362-30711485 (+)
DBA/2J	ENSMUSG00185034439	miRNA gene	Chr19:31266663-31266786 (+)
FVB/NJ	ENSMUSG00205007877	miRNA gene	Chr19:30517941-30518062 (+)
JF1/MsJ	ENSUMUG00000047240	miRNA gene	Chr19:31452220-31452356 (+)
LP/J	ENSMUSG00230035933	miRNA gene	Chr19:32053512-32053635 (+)
NOD/ShiLtJ	ENSMUSG00190011528	miRNA gene	Chr19:30636575-30636698 (+)
NZO/HlLtJ	ENSMUSG00225029924	miRNA gene	Chr19:35651724-35651847 (+)
PWK/PhJ	ENSLUMG00010001338	miRNA gene	Chr19:30814983-30815095 (+)
SPRET/EiJ	ENSMSPG00010025773	miRNA gene	Chr19:30457197-30457293 (+)
WSB/EiJ	ENSIUOG00005040216	miRNA gene	Chr19:30177808-30177937 (+)

Homology

• Gene Tree
  Gm54653
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075813 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075813	Ensembl Gene Model | MGI Sequence Detail	124	C57BL/6J
transcript	ENSMUST00020181907	Ensembl | MGI Sequence Detail	124	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;