Gm54652 Gene Detail

Summary

• Symbol
  Gm54652
• Name
  predicted gene, 54652

• Feature Type
  snRNA gene
• IDs
  MGI:6845782
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:122258376-122258531 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845782	snRNA gene	Chr3:122258376-122258531 (+)
129S1/SvImJ	ENSMUSG00200027013	snRNA gene	Chr3:118957147-118957302 (+)
A/J	ENSMUSG00195015989	snRNA gene	Chr3:119164659-119164814 (+)
AKR/J	ENSMUSG00220025771	snRNA gene	Chr3:117549476-117549631 (+)
BALB/cJ	ENSMUSG00180030104	snRNA gene	Chr3:119101200-119101355 (+)
C3H/HeJ	ENSMUSG00175027613	snRNA gene	Chr3:118647989-118648144 (+)
C57BL/6NJ	ENSMUSG00215008679	snRNA gene	Chr3:119395427-119395582 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034414	snRNA gene	Chr3:119670578-119670733 (+)
CBA/J	ENSMUSG00210002930	snRNA gene	Chr3:119278923-119279078 (+)
DBA/2J	ENSMUSG00185007765	snRNA gene	Chr3:119843184-119843339 (+)
FVB/NJ	ENSMUSG00205008112	snRNA gene	Chr3:118213495-118213650 (+)
JF1/MsJ	ENSUMUG00000003423	snRNA gene	Chr3:118648863-118649018 (+)
LP/J	ENSMUSG00230011938	snRNA gene	Chr3:121808884-121809039 (+)
NOD/ShiLtJ	ENSMUSG00190034080	snRNA gene	Chr3:120224551-120224706 (+)
NZO/HlLtJ	ENSMUSG00225003481	snRNA gene	Chr3:124283456-124283611 (+)
PWK/PhJ	ENSLUMG00010009898	snRNA gene	Chr3:118633487-118633642 (+)
SPRET/EiJ	ENSMSPG00010031539	snRNA gene	Chr3:119376085-119376240 (+)
WSB/EiJ	ENSIUOG00005007013	snRNA gene	Chr3:119447351-119447506 (+)

Homology

• Gene Tree
  Gm54652
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075702 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075702	Ensembl Gene Model | MGI Sequence Detail	156	C57BL/6J
transcript	ENSMUST00020182700	Ensembl | MGI Sequence Detail	156	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;