Gm54648 Gene Detail

Summary

• Symbol
  Gm54648
• Name
  predicted gene, 54648

• Feature Type
  rRNA gene
• IDs
  MGI:6845774
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:156421199-156421292 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845774	rRNA gene	ChrX:156421199-156421292 (-)
129S1/SvImJ	ENSMUSG00200027555	rRNA gene	ChrX:133165922-133166015 (-)
A/J	ENSMUSG00195038530	rRNA gene	ChrX:138261173-138261266 (-)
AKR/J	ENSMUSG00220036093	rRNA gene	ChrX:130105718-130105811 (-)
BALB/cJ	ENSMUSG00180040783	rRNA gene	ChrX:133620601-133620694 (-)
C3H/HeJ	ENSMUSG00175027314	rRNA gene	ChrX:138198378-138198471 (-)
C57BL/6NJ	ENSMUSG00215026609	rRNA gene	ChrX:133996193-133996286 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033623	rRNA gene	ChrX:135842596-135842689 (-)
CBA/J	ENSMUSG00210037744	rRNA gene	ChrX:135506765-135506858 (-)
DBA/2J	ENSMUSG00185045866	rRNA gene	ChrX:150467590-150467683 (-)
FVB/NJ	ENSMUSG00205031744	rRNA gene	ChrX:134116979-134117072 (-)
JF1/MsJ	ENSUMUG00000042646	rRNA gene	ChrX:170871278-170871371 (-)
LP/J	ENSMUSG00230013860	rRNA gene	ChrX:157250875-157250968 (-)
NOD/ShiLtJ	ENSMUSG00190038266	rRNA gene	ChrX:134640430-134640523 (-)
NZO/HlLtJ	ENSMUSG00225042572	rRNA gene	ChrX:160650665-160650758 (-)
PWK/PhJ	ENSLUMG00010042161	rRNA gene	ChrX:131980586-131980679 (-)
SPRET/EiJ	ENSMSPG00010019230	rRNA gene	ChrX:137081505-137081598 (-)
WSB/EiJ	ENSIUOG00005025685	rRNA gene	ChrX:134980391-134980484 (-)

Homology

• Gene Tree
  Gm54648
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075957 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075957	Ensembl Gene Model | MGI Sequence Detail	94	C57BL/6J
transcript	ENSMUST00020183772	Ensembl | MGI Sequence Detail	94	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;