Gm54647 Gene Detail

Summary

• Symbol
  Gm54647
• Name
  predicted gene, 54647

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845772
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:82700963-82701204 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  180 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845772	unclassified non-coding RNA gene	Chr3:82700963-82701204 (-)
129S1/SvImJ	ENSMUSG00200019181	unclassified non-coding RNA gene	Chr3:79540740-79540981 (-)
A/J	ENSMUSG00195012046	unclassified non-coding RNA gene	Chr3:79556866-79557107 (-)
AKR/J	ENSMUSG00220001482	unclassified non-coding RNA gene	Chr3:79517010-79517251 (-)
BALB/cJ	ENSMUSG00180001917	unclassified non-coding RNA gene	Chr3:79689799-79690040 (-)
C3H/HeJ	ENSMUSG00175007924	unclassified non-coding RNA gene	Chr3:79483521-79483762 (-)
C57BL/6NJ	ENSMUSG00215002066	unclassified non-coding RNA gene	Chr3:79941029-79941270 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002010	unclassified non-coding RNA gene	Chr3:79039533-79039782 (-)
CBA/J	ENSMUSG00210025700	unclassified non-coding RNA gene	Chr3:79628251-79628492 (-)
DBA/2J	ENSMUSG00185012769	unclassified non-coding RNA gene	Chr3:79774478-79774719 (-)
FVB/NJ	ENSMUSG00205006485	unclassified non-coding RNA gene	Chr3:78551006-78551247 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230036934	unclassified non-coding RNA gene	Chr3:81749270-81749511 (-)
NOD/ShiLtJ	ENSMUSG00190002731	unclassified non-coding RNA gene	Chr3:79996444-79996685 (-)
NZO/HlLtJ	ENSMUSG00225007955	unclassified non-coding RNA gene	Chr3:84486426-84486667 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010017551	unclassified non-coding RNA gene	Chr3:80175045-80175309 (-)
WSB/EiJ	ENSIUOG00005003053	unclassified non-coding RNA gene	Chr3:79974561-79974802 (-)

Homology

• Gene Tree
  Gm54647
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002074992 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074992	Ensembl Gene Model | MGI Sequence Detail	242	C57BL/6J
transcript	ENSMUST00020182471	Ensembl | MGI Sequence Detail	242	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;