Gm54644 Gene Detail

Summary

• Symbol
  Gm54644
• Name
  predicted gene, 54644

• Feature Type
  miRNA gene
• IDs
  MGI:6845766
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:33570007-33570113 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  27

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845766	miRNA gene	Chr19:33570007-33570113 (-)
129S1/SvImJ	ENSMUSG00200032164	miRNA gene	Chr19:30290903-30291009 (-)
A/J	ENSMUSG00195011759	miRNA gene	Chr19:30457130-30457236 (-)
AKR/J	ENSMUSG00220019370	miRNA gene	Chr19:30522917-30522935 (-)
BALB/cJ	ENSMUSG00180034106	miRNA gene	Chr19:30786028-30786134 (-)
C3H/HeJ	ENSMUSG00175042867	miRNA gene	Chr19:30182010-30182116 (-)
C57BL/6NJ	ENSMUSG00215029201	miRNA gene	Chr19:30209384-30209490 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018834	miRNA gene	Chr19:30024302-30024408 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185035077	miRNA gene	Chr19:30790295-30790401 (-)
DBA/2J	ENSMUSG00185040902	miRNA gene	Chr2:15544320-15544627 (-)
DBA/2J	ENSMUSG00185033592	miRNA gene	ChrX:27553209-27553315 (-)
FVB/NJ	ENSMUSG00205007904	miRNA gene	Chr19:30186658-30186764 (-)
JF1/MsJ	ENSUMUG00000031718	miRNA gene	ChrX:39625180-39625286 (-)
JF1/MsJ	ENSUMUG00000031368	miRNA gene	ChrX:45035443-45035549 (-)
JF1/MsJ	ENSUMUG00000031506	miRNA gene	ChrX:46584613-46584719 (+)
JF1/MsJ	ENSUMUG00000031293	miRNA gene	ChrX:43314554-43314660 (-)
JF1/MsJ	ENSUMUG00000031181	miRNA gene	ChrX:41107125-41107231 (-)
JF1/MsJ	ENSUMUG00000031217	miRNA gene	ChrX:41575285-41575391 (-)
JF1/MsJ	ENSUMUG00000048867	miRNA gene	Chr19:30990908-30991014 (-)
LP/J	ENSMUSG00230035946	miRNA gene	Chr19:31577160-31577266 (-)
LP/J	ENSMUSG00230015151	miRNA gene	ChrX:32207364-32207470 (-)
NOD/ShiLtJ	ENSMUSG00190022415	miRNA gene	Chr19:30159440-30159546 (-)
NZO/HlLtJ	ENSMUSG00225014722	miRNA gene	Chr1:32140567-32140673 (-)
NZO/HlLtJ	ENSMUSG00225041676	miRNA gene	ChrX:37474202-37474308 (-)
NZO/HlLtJ	ENSMUSG00225029953	miRNA gene	Chr19:35348173-35348279 (-)
PWK/PhJ	ENSLUMG00010001414	miRNA gene	Chr19:30359917-30360023 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005029350	miRNA gene	Chr19:29873214-29873320 (-)

Homology

• Gene Tree
  Gm54644
  

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00002075994 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075994	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020183744	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;