Gm54639 Gene Detail

Summary

• Symbol
  Gm54639
• Name
  predicted gene, 54639

• Feature Type
  unclassified gene
• IDs
  MGI:6845756
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:32463323-32465598 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845756	unclassified gene	Chr19:32463323-32465598 (+)
129S1/SvImJ	ENSMUSG00200020952	unclassified gene	Chr19:29183549-29185824 (+)
A/J	ENSMUSG00195035871	unclassified gene	Chr19:29352892-29355167 (+)
AKR/J	ENSMUSG00220019819	unclassified gene	Chr19:29409550-29411825 (+)
BALB/cJ	ENSMUSG00180013739	unclassified gene	Chr19:29681823-29684098 (+)
C3H/HeJ	ENSMUSG00175025967	unclassified gene	Chr19:29062666-29064941 (+)
C57BL/6NJ	ENSMUSG00215028049	unclassified gene	Chr19:29102440-29104715 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018362	unclassified gene	Chr19:28923982-28926256 (+)
CBA/J	ENSMUSG00210014920	unclassified gene	Chr19:29306085-29308360 (+)
DBA/2J	ENSMUSG00185026487	unclassified gene	Chr19:29678085-29680360 (+)
FVB/NJ	ENSMUSG00205013039	unclassified gene	Chr19:29084945-29087220 (+)
JF1/MsJ	ENSUMUG00000041028	unclassified gene	Chr19:29934037-29936323 (+)
LP/J	ENSMUSG00230035518	unclassified gene	Chr19:30469875-30472150 (+)
NOD/ShiLtJ	ENSMUSG00190021971	unclassified gene	Chr19:29052431-29054706 (+)
NZO/HlLtJ	ENSMUSG00225029785	unclassified gene	Chr19:34248837-34251112 (+)
PWK/PhJ	ENSLUMG00010034331	unclassified gene	Chr19:29296679-29298970 (+)
SPRET/EiJ	ENSMSPG00010038471	unclassified gene	Chr19:29282661-29284908 (+)
WSB/EiJ	ENSIUOG00005028059	unclassified gene	Chr19:28761747-28764022 (+)

Homology

• Gene Tree
  Gm54639
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000118106 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118106	Ensembl Gene Model | MGI Sequence Detail	2276	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm54639:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr155962	Chr19:32463283-32463384 (+)	11 bp