Gm54636 Gene Detail

Summary

• Symbol
  Gm54636
• Name
  predicted gene, 54636

• Feature Type
  snoRNA gene
• IDs
  MGI:6845750
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:42975173-42975240 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845750	snoRNA gene	Chr8:42975173-42975240 (-)
129S1/SvImJ	ENSMUSG00200008275	snoRNA gene	Chr8:38082555-38082622 (-)
A/J	ENSMUSG00195006393	snoRNA gene	Chr8:38575621-38575688 (-)
AKR/J	ENSMUSG00220006614	snoRNA gene	Chr8:38382556-38382623 (-)
BALB/cJ	ENSMUSG00180003427	snoRNA gene	Chr8:38120000-38120067 (-)
C3H/HeJ	ENSMUSG00175015069	snoRNA gene	Chr8:38241126-38241193 (-)
C57BL/6NJ	ENSMUSG00215010084	snoRNA gene	Chr8:38042662-38042729 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005691	snoRNA gene	Chr8:38153224-38153291 (-)
CBA/J	ENSMUSG00210012873	snoRNA gene	Chr8:38138145-38138212 (-)
DBA/2J	ENSMUSG00185006124	snoRNA gene	Chr8:43981942-43982009 (-)
FVB/NJ	ENSMUSG00205002445	snoRNA gene	Chr8:37284352-37284419 (-)
JF1/MsJ	ENSUMUG00000016012	snoRNA gene	Chr8:45709230-45709297 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190016105	snoRNA gene	Chr8:38161529-38161596 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010013539	snoRNA gene	Chr8:37948216-37948283 (-)
SPRET/EiJ	ENSMSPG00010004682	snoRNA gene	Chr8:38805768-38805835 (-)
WSB/EiJ	ENSIUOG00005005996	snoRNA gene	Chr8:39025435-39025502 (-)

Homology

• Gene Tree
  Gm54636
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075771 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075771	Ensembl Gene Model | MGI Sequence Detail	68	C57BL/6J
transcript	ENSMUST00020182442	Ensembl | MGI Sequence Detail	68	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;