Gm54628 Gene Detail

Summary

• Symbol
  Gm54628
• Name
  predicted gene, 54628

• Feature Type
  miRNA gene
• IDs
  MGI:6845734
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:30238841-30238917 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845734	miRNA gene	Chr19:30238841-30238917 (-)
129S1/SvImJ	ENSMUSG00200021008	miRNA gene	Chr19:26973183-26973259 (-)
A/J	ENSMUSG00195037427	miRNA gene	Chr19:27130813-27130889 (-)
AKR/J	ENSMUSG00220020117	miRNA gene	Chr19:27187862-27187938 (-)
BALB/cJ	ENSMUSG00180013669	miRNA gene	Chr19:27463018-27463094 (-)
C3H/HeJ	ENSMUSG00175026539	miRNA gene	Chr19:26835367-26835443 (-)
C57BL/6NJ	ENSMUSG00215030590	miRNA gene	Chr19:26876115-26876191 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210014937	miRNA gene	Chr19:27066271-27066347 (-)
DBA/2J	ENSMUSG00185026461	miRNA gene	Chr19:27453032-27453108 (-)
FVB/NJ	ENSMUSG00205013635	miRNA gene	Chr19:26845154-26845230 (-)
JF1/MsJ	ENSUMUG00000041371	miRNA gene	Chr19:27679619-27679695 (-)
LP/J	ENSMUSG00230028892	miRNA gene	Chr19:28266739-28266815 (-)
NOD/ShiLtJ	ENSMUSG00190022758	miRNA gene	Chr19:26830127-26830203 (-)
NZO/HlLtJ	ENSMUSG00225029887	miRNA gene	Chr19:32022781-32022857 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010039468	miRNA gene	Chr19:27032828-27032904 (-)
WSB/EiJ	ENSIUOG00005029558	miRNA gene	Chr19:26546910-26546986 (-)

Homology

• Gene Tree
  Gm54628
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075891 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075891	Ensembl Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	ENSMUST00020182290	Ensembl | MGI Sequence Detail	77	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;