Gm54627 Gene Detail

Summary

• Symbol
  Gm54627
• Name
  predicted gene, 54627

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845732
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:46014710-46015013 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845732	unclassified non-coding RNA gene	Chr6:46014710-46015013 (+)
129S1/SvImJ	ENSMUSG00200005373	unclassified non-coding RNA gene	Chr6:43100549-43100852 (+)
A/J	ENSMUSG00195007297	unclassified non-coding RNA gene	Chr6:42964363-42964666 (+)
AKR/J	ENSMUSG00220004754	unclassified non-coding RNA gene	Chr6:42654049-42654352 (+)
BALB/cJ	ENSMUSG00180024164	unclassified non-coding RNA gene	Chr6:43178200-43178503 (+)
C3H/HeJ	ENSMUSG00175017132	unclassified non-coding RNA gene	Chr6:43010569-43010872 (+)
C57BL/6NJ	ENSMUSG00215009247	unclassified non-coding RNA gene	Chr6:43149535-43149838 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004980	unclassified non-coding RNA gene	Chr6:42476925-42477228 (+)
CBA/J	ENSMUSG00210018264	unclassified non-coding RNA gene	Chr6:43067391-43067694 (+)
DBA/2J	ENSMUSG00185014567	unclassified non-coding RNA gene	Chr6:43162972-43163275 (+)
FVB/NJ	ENSMUSG00205033192	unclassified non-coding RNA gene	Chr6:43241932-43242235 (+)
JF1/MsJ	ENSUMUG00000012838	unclassified non-coding RNA gene	Chr6:42699647-42699950 (+)
LP/J	ENSMUSG00230021498	unclassified non-coding RNA gene	Chr6:44087977-44088280 (+)
NOD/ShiLtJ	ENSMUSG00190033820	unclassified non-coding RNA gene	Chr6:42979555-42979858 (+)
NZO/HlLtJ	ENSMUSG00225019384	unclassified non-coding RNA gene	Chr6:46065403-46065706 (+)
PWK/PhJ	ENSLUMG00010022554	unclassified non-coding RNA gene	Chr6:42536528-42536831 (+)
SPRET/EiJ	ENSMSPG00010010941	unclassified non-coding RNA gene	Chr6:43180701-43181004 (+)
WSB/EiJ	ENSIUOG00005027800	unclassified non-coding RNA gene	Chr6:43270352-43270655 (+)

Homology

• Gene Tree
  Gm54627
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076345 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076345	Ensembl Gene Model | MGI Sequence Detail	304	C57BL/6J
transcript	ENSMUST00020182349	Ensembl | MGI Sequence Detail	304	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;