Gm54626 Gene Detail

Summary

• Symbol
  Gm54626
• Name
  predicted gene, 54626

• Feature Type
  rRNA gene
• IDs
  MGI:6845730
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:154326286-154326404 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845730	rRNA gene	ChrX:154326286-154326404 (+)
129S1/SvImJ	ENSMUSG00200033389	rRNA gene	ChrX:131060886-131061004 (+)
A/J	ENSMUSG00195038928	rRNA gene	ChrX:136153220-136153338 (+)
AKR/J	ENSMUSG00220034725	rRNA gene	ChrX:127999459-127999577 (+)
BALB/cJ	ENSMUSG00180040708	rRNA gene	ChrX:131523185-131523303 (+)
C3H/HeJ	ENSMUSG00175027688	rRNA gene	ChrX:136099935-136100053 (+)
C57BL/6NJ	ENSMUSG00215027803	rRNA gene	ChrX:131893327-131893445 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035039	rRNA gene	ChrX:133810076-133810194 (+)
CBA/J	ENSMUSG00210039437	rRNA gene	ChrX:133404654-133404772 (+)
DBA/2J	ENSMUSG00185045673	rRNA gene	ChrX:148369998-148370116 (+)
FVB/NJ	ENSMUSG00205027314	rRNA gene	ChrX:132023319-132023437 (+)
JF1/MsJ	ENSUMUG00000046171	rRNA gene	ChrX:168769923-168770041 (+)
LP/J	ENSMUSG00230014151	rRNA gene	ChrX:155153458-155153576 (+)
NOD/ShiLtJ	ENSMUSG00190037447	rRNA gene	ChrX:132541014-132541132 (+)
NZO/HlLtJ	ENSMUSG00225042691	rRNA gene	ChrX:158541882-158542000 (+)
PWK/PhJ	ENSLUMG00010034227	rRNA gene	ChrX:129866218-129866336 (+)
SPRET/EiJ	ENSMSPG00010019550	rRNA gene	ChrX:134919440-134919558 (+)
WSB/EiJ	ENSIUOG00005025746	rRNA gene	ChrX:132917074-132917192 (+)

Homology

• Gene Tree
  Gm54626
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076897 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076897	Ensembl Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	ENSMUST00020183454	Ensembl | MGI Sequence Detail	119	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;