Gm54625 Gene Detail

Summary

• Symbol
  Gm54625
• Name
  predicted gene, 54625

• Feature Type
  snoRNA gene
• IDs
  MGI:6845728
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:117019240-117019316 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845728	snoRNA gene	Chr10:117019240-117019316 (-)
129S1/SvImJ	ENSMUSG00200026671	snoRNA gene	Chr10:113429599-113429675 (-)
A/J	ENSMUSG00195023175	snoRNA gene	Chr10:113864365-113864441 (-)
AKR/J	ENSMUSG00220014822	snoRNA gene	Chr10:113437972-113438048 (-)
BALB/cJ	ENSMUSG00180016988	snoRNA gene	Chr10:113881266-113881342 (-)
C3H/HeJ	ENSMUSG00175026391	snoRNA gene	Chr10:113826468-113826544 (-)
C57BL/6NJ	ENSMUSG00215015731	snoRNA gene	Chr10:113522557-113522633 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034216	snoRNA gene	Chr10:112847369-112847445 (-)
CBA/J	ENSMUSG00210021418	snoRNA gene	Chr10:113676054-113676130 (-)
DBA/2J	ENSMUSG00185009880	snoRNA gene	Chr10:113799155-113799231 (-)
FVB/NJ	ENSMUSG00205024689	snoRNA gene	Chr10:113125241-113125317 (-)
JF1/MsJ	ENSUMUG00000025890	snoRNA gene	Chr10:115107994-115108069 (-)
LP/J	ENSMUSG00230026240	snoRNA gene	Chr10:115749127-115749203 (-)
NOD/ShiLtJ	ENSMUSG00190019324	snoRNA gene	Chr10:113925761-113925837 (-)
NZO/HlLtJ	ENSMUSG00225018084	snoRNA gene	Chr10:120004248-120004324 (-)
PWK/PhJ	ENSLUMG00010014183	snoRNA gene	Chr10:113505080-113505155 (-)
SPRET/EiJ	ENSMSPG00010017597	snoRNA gene	Chr10:115444639-115444714 (-)
WSB/EiJ	ENSIUOG00005014197	snoRNA gene	Chr10:113519372-113519448 (-)

Homology

• Gene Tree
  Gm54625
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074987 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074987	Ensembl Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	ENSMUST00020181905	Ensembl | MGI Sequence Detail	77	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;